Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 snR161snR161 161 nt-0.11□□□□□ -2.43
SMX3P54999 YOL014WYOL014W 375 nt-0.23□□□□□ -2.45
SMX3P54999 snR40snR40 97 nt-0.41□□□□□ -2.48
SMX3P54999 YJL113WYJL113W 4647 nt-0.41□□□□□ -2.48
SMX3P54999 URB1YKL014C 5295 nt-0.47□□□□□ -2.49
SMX3P54999 CDC65tQ(CUG)M 72 nt-0.51□□□□□ -2.49
SMX3P54999 YOR335W-AYOR335W-A 81 nt-0.55□□□□□ -2.5
SMX3P54999 snR6snR6 112 nt-0.56□□□□□ -2.5
SMX3P54999 RPL41BYDL133C-A 78 nt-0.58□□□□□ -2.5
SMX3P54999 snR33snR33 183 nt-0.6□□□□□ -2.51
SMX3P54999 YMR315W-AYMR315W-A 108 nt-0.61□□□□□ -2.51
SMX3P54999 tP(UGG)QtP(UGG)Q 72 nt-0.68□□□□□ -2.52
SMX3P54999 YHL009W-BYHL009W-B 5409 nt-0.71□□□□□ -2.52
SMX3P54999 snR73snR73 106 nt-0.73□□□□□ -2.53
SMX3P54999 tT(UGU)G1tT(UGU)G1 72 nt-0.89□□□□□ -2.55
SMX3P54999 tT(UGU)G2tT(UGU)G2 72 nt-0.89□□□□□ -2.55
SMX3P54999 tT(UGU)PtT(UGU)P 72 nt-0.89□□□□□ -2.55
SMX3P54999 YOR309CYOR309C 381 nt-0.9□□□□□ -2.55
SMX3P54999 snR58snR58 96 nt-1.06□□□□□ -2.58
SMX3P54999 tC(GCA)QtC(GCA)Q 76 nt-1.07□□□□□ -2.58
SMX3P54999 tY(GUA)QtY(GUA)Q 84 nt-1.16□□□□□ -2.6
SMX3P54999 YBR223W-AYBR223W-A 120 nt-1.24□□□□□ -2.61
SMX3P54999 snR87snR87 109 nt-1.37□□□□□ -2.63
SMX3P54999 YNR077CYNR077C 255 nt-1.63□□□□□ -2.67
SMX3P54999 YBR126W-BYBR126W-B 144 nt-2.01□□□□□ -2.73
SMX3P54999 YDR543CYDR543C 300 nt-2.89□□□□□ -2.87
SMX3P54999 YJL136W-AYJL136W-A 84 nt-2.91□□□□□ -2.88
SMX3P54999 YOL166W-AYOL166W-A 156 nt-3.33□□□□□ -2.94
SMX3P54999 YJR162CYJR162C 351 nt-3.98□□□□□ -3.05
Retrieved 29 of 7,029 protein–RNA pairs in 3.1 ms