Protein–RNA interactions for Protein: P53930

YAF9, Protein AF-9 homolog, yeastyeast

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YAF9P53930 snR77snR77 88 nt0.02□□□□□ -2.41
YAF9P53930 snR161snR161 161 nt-0.11□□□□□ -2.43
YAF9P53930 YJL113WYJL113W 4647 nt-0.25□□□□□ -2.45
YAF9P53930 snR40snR40 97 nt-0.39□□□□□ -2.47
YAF9P53930 YNR077CYNR077C 255 nt-0.41□□□□□ -2.48
YAF9P53930 YHL009W-BYHL009W-B 5409 nt-0.53□□□□□ -2.49
YAF9P53930 CDC65tQ(CUG)M 72 nt-0.6□□□□□ -2.51
YAF9P53930 RPL41BYDL133C-A 78 nt-0.61□□□□□ -2.51
YAF9P53930 snR6snR6 112 nt-0.64□□□□□ -2.51
YAF9P53930 YOR335W-AYOR335W-A 81 nt-0.64□□□□□ -2.51
YAF9P53930 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
YAF9P53930 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
YAF9P53930 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
YAF9P53930 snR33snR33 183 nt-0.65□□□□□ -2.51
YAF9P53930 URB1YKL014C 5295 nt-0.68□□□□□ -2.52
YAF9P53930 YMR315W-AYMR315W-A 108 nt-0.72□□□□□ -2.52
YAF9P53930 YBR223W-AYBR223W-A 120 nt-0.81□□□□□ -2.54
YAF9P53930 tP(UGG)QtP(UGG)Q 72 nt-0.82□□□□□ -2.54
YAF9P53930 snR73snR73 106 nt-0.85□□□□□ -2.55
YAF9P53930 YOR309CYOR309C 381 nt-1.11□□□□□ -2.59
YAF9P53930 snR58snR58 96 nt-1.15□□□□□ -2.59
YAF9P53930 tC(GCA)QtC(GCA)Q 76 nt-1.15□□□□□ -2.59
YAF9P53930 tY(GUA)QtY(GUA)Q 84 nt-1.25□□□□□ -2.61
YAF9P53930 YOL166W-AYOL166W-A 156 nt-1.52□□□□□ -2.65
YAF9P53930 snR87snR87 109 nt-1.65□□□□□ -2.67
YAF9P53930 YDR543CYDR543C 300 nt-1.83□□□□□ -2.7
YAF9P53930 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
YAF9P53930 YJR162CYJR162C 351 nt-3.01□□□□□ -2.89
YAF9P53930 YJL136W-AYJL136W-A 84 nt-3.28□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 79.5 ms