Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YOR335W-AYOR335W-A 81 nt0.66□□□□□ -2.3
CAF120P53836 snR6snR6 112 nt0.64□□□□□ -2.31
CAF120P53836 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
CAF120P53836 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
CAF120P53836 snR58snR58 96 nt0.56□□□□□ -2.32
CAF120P53836 snR128snR128 126 nt0.56□□□□□ -2.32
CAF120P53836 snR161snR161 161 nt0.51□□□□□ -2.33
CAF120P53836 tA(UGC)QtA(UGC)Q 76 nt0.5□□□□□ -2.33
CAF120P53836 snR73snR73 106 nt0.46□□□□□ -2.34
CAF120P53836 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
CAF120P53836 URB1YKL014C 5295 nt0.22□□□□□ -2.37
CAF120P53836 CDC65tQ(CUG)M 72 nt0.19□□□□□ -2.38
CAF120P53836 YMR315W-AYMR315W-A 108 nt0.1□□□□□ -2.39
CAF120P53836 YHL009W-BYHL009W-B 5409 nt-0.01□□□□□ -2.41
CAF120P53836 snR87snR87 109 nt-0.06□□□□□ -2.42
CAF120P53836 YOR309CYOR309C 381 nt-0.12□□□□□ -2.43
CAF120P53836 tP(UGG)QtP(UGG)Q 72 nt-0.3□□□□□ -2.46
CAF120P53836 snR33snR33 183 nt-0.35□□□□□ -2.47
CAF120P53836 YNR077CYNR077C 255 nt-0.42□□□□□ -2.48
CAF120P53836 tT(UGU)G1tT(UGU)G1 72 nt-0.48□□□□□ -2.49
CAF120P53836 tT(UGU)G2tT(UGU)G2 72 nt-0.48□□□□□ -2.49
CAF120P53836 tT(UGU)PtT(UGU)P 72 nt-0.48□□□□□ -2.49
CAF120P53836 tY(GUA)QtY(GUA)Q 84 nt-0.67□□□□□ -2.52
CAF120P53836 YBR223W-AYBR223W-A 120 nt-0.68□□□□□ -2.52
CAF120P53836 YBR126W-BYBR126W-B 144 nt-1.11□□□□□ -2.59
CAF120P53836 YDR543CYDR543C 300 nt-1.57□□□□□ -2.66
CAF120P53836 YOL166W-AYOL166W-A 156 nt-1.65□□□□□ -2.67
CAF120P53836 YJL136W-AYJL136W-A 84 nt-1.66□□□□□ -2.68
CAF120P53836 YJR162CYJR162C 351 nt-2.19□□□□□ -2.76
Retrieved 29 of 7,029 protein–RNA pairs in 6.3 ms