Protein–RNA interactions for Protein: P53599

SSK2, MAP kinase kinase kinase SSK2, yeast

Predictions only

Length 1,579 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	P53599	YLR294C	YLR294C	330 nt		-7.2	□□□□□ -3.56
SSK2	P53599	Q0143	Q0143	153 nt		-7.22	□□□□□ -3.57
SSK2	P53599	YCL001W-B	YCL001W-B	255 nt		-7.25	□□□□□ -3.57
SSK2	P53599	snR65	snR65	100 nt		-7.27	□□□□□ -3.57
SSK2	P53599	Q0017	Q0017	162 nt		-7.33	□□□□□ -3.58
SSK2	P53599	snR62	snR62	100 nt		-7.45	□□□□□ -3.6
SSK2	P53599	YGL041C-B	YGL041C-B	183 nt		-7.74	□□□□□ -3.65
SSK2	P53599	tR(UCU)Q1	tR(UCU)Q1	73 nt		-7.74	□□□□□ -3.65
SSK2	P53599	YLR149C-A	YLR149C-A	87 nt		-7.93	□□□□□ -3.68
SSK2	P53599	snR61	snR61	90 nt		-8.03	□□□□□ -3.69
SSK2	P53599	YOR231C-A	YOR231C-A	201 nt		-8.1	□□□□□ -3.71
SSK2	P53599	YNL103W-A	YNL103W-A	90 nt		-8.11	□□□□□ -3.71
SSK2	P53599	YMR046W-A	YMR046W-A	129 nt		-8.2	□□□□□ -3.72
SSK2	P53599	snR53	snR53	91 nt		-8.25	□□□□□ -3.73
SSK2	P53599	YLR466C-B	YLR466C-B	117 nt		-8.6	□□□□□ -3.79
SSK2	P53599	YNL338W	YNL338W	159 nt		-8.61	□□□□□ -3.79
SSK2	P53599	VAR1	Q0140	1197 nt		-8.67	□□□□□ -3.8
SSK2	P53599	YMR326C	YMR326C	309 nt		-8.71	□□□□□ -3.8
SSK2	P53599	Q0032	Q0032	291 nt		-8.82	□□□□□ -3.82
SSK2	P53599	tM(CAU)Q1	tM(CAU)Q1	76 nt		-9.03	□□□□□ -3.86
SSK2	P53599	YLL066W-B	YLL066W-B	171 nt		-9.11	□□□□□ -3.87
SSK2	P53599	tR(ACG)Q2	tR(ACG)Q2	74 nt		-9.5	□□□□□ -3.93
SSK2	P53599	YHR217C	YHR217C	462 nt		-9.76	□□□□□ -3.97
SSK2	P53599	snR75	snR75	89 nt		-10.26	□□□□□ -4.05
SSK2	P53599	YDL247W-A	YDL247W-A	75 nt		-11.04	□□□□□ -4.18
SSK2	P53599	ATP8	Q0080	147 nt		-11.11	□□□□□ -4.19
SSK2	P53599	YBL109W	YBL109W	336 nt		-11.11	□□□□□ -4.19
SSK2	P53599	Q0144	Q0144	330 nt		-11.46	□□□□□ -4.24
SSK2	P53599	Q0092	Q0092	141 nt		-12.6	□□□□□ -4.43

Retrieved 29 of 7,029 protein–RNA pairs in 4.3 ms