Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 snR77snR77 88 nt-0.22□□□□□ -2.44
SPC98P53540 snR161snR161 161 nt-0.25□□□□□ -2.45
SPC98P53540 YHL009W-BYHL009W-B 5409 nt-0.31□□□□□ -2.46
SPC98P53540 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
SPC98P53540 snR75snR75 89 nt-0.51□□□□□ -2.49
SPC98P53540 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
SPC98P53540 snR33snR33 183 nt-0.64□□□□□ -2.51
SPC98P53540 snR6snR6 112 nt-0.66□□□□□ -2.52
SPC98P53540 YOR335W-AYOR335W-A 81 nt-0.71□□□□□ -2.52
SPC98P53540 snR40snR40 97 nt-0.71□□□□□ -2.52
SPC98P53540 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
SPC98P53540 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
SPC98P53540 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
SPC98P53540 YMR315W-AYMR315W-A 108 nt-0.75□□□□□ -2.53
SPC98P53540 RPL41BYDL133C-A 78 nt-0.78□□□□□ -2.53
SPC98P53540 tP(UGG)QtP(UGG)Q 72 nt-0.79□□□□□ -2.54
SPC98P53540 snR73snR73 106 nt-0.86□□□□□ -2.55
SPC98P53540 YOR309CYOR309C 381 nt-1.02□□□□□ -2.57
SPC98P53540 YBR223W-AYBR223W-A 120 nt-1.05□□□□□ -2.58
SPC98P53540 YNR077CYNR077C 255 nt-1.21□□□□□ -2.6
SPC98P53540 tY(GUA)QtY(GUA)Q 84 nt-1.22□□□□□ -2.6
SPC98P53540 snR58snR58 96 nt-1.25□□□□□ -2.61
SPC98P53540 tC(GCA)QtC(GCA)Q 76 nt-1.28□□□□□ -2.61
SPC98P53540 snR87snR87 109 nt-1.55□□□□□ -2.66
SPC98P53540 YBR126W-BYBR126W-B 144 nt-1.93□□□□□ -2.72
SPC98P53540 YDR543CYDR543C 300 nt-2.41□□□□□ -2.8
SPC98P53540 YOL166W-AYOL166W-A 156 nt-2.62□□□□□ -2.83
SPC98P53540 YJL136W-AYJL136W-A 84 nt-3.19□□□□□ -2.92
SPC98P53540 YJR162CYJR162C 351 nt-3.42□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 7.1 ms