Protein–RNA interactions for Protein: P53294

PUS6, tRNA pseudouridine(31) synthase, yeastyeast

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUS6P53294 YOL013W-AYOL013W-A 192 nt0.45□□□□□ -2.34
PUS6P53294 YJL113WYJL113W 4647 nt0.33□□□□□ -2.36
PUS6P53294 tA(UGC)QtA(UGC)Q 76 nt0.3□□□□□ -2.36
PUS6P53294 snR161snR161 161 nt0.19□□□□□ -2.38
PUS6P53294 YOR335W-AYOR335W-A 81 nt-0.04□□□□□ -2.42
PUS6P53294 RPL41BYDL133C-A 78 nt-0.06□□□□□ -2.42
PUS6P53294 snR6snR6 112 nt-0.08□□□□□ -2.42
PUS6P53294 CDC65tQ(CUG)M 72 nt-0.27□□□□□ -2.45
PUS6P53294 snR73snR73 106 nt-0.3□□□□□ -2.46
PUS6P53294 tC(GCA)QtC(GCA)Q 76 nt-0.3□□□□□ -2.46
PUS6P53294 YHL009W-BYHL009W-B 5409 nt-0.4□□□□□ -2.47
PUS6P53294 YMR315W-AYMR315W-A 108 nt-0.41□□□□□ -2.48
PUS6P53294 URB1YKL014C 5295 nt-0.42□□□□□ -2.48
PUS6P53294 snR58snR58 96 nt-0.46□□□□□ -2.48
PUS6P53294 tT(UGU)G1tT(UGU)G1 72 nt-0.55□□□□□ -2.5
PUS6P53294 tT(UGU)G2tT(UGU)G2 72 nt-0.55□□□□□ -2.5
PUS6P53294 tT(UGU)PtT(UGU)P 72 nt-0.55□□□□□ -2.5
PUS6P53294 snR33snR33 183 nt-0.55□□□□□ -2.5
PUS6P53294 tP(UGG)QtP(UGG)Q 72 nt-0.69□□□□□ -2.52
PUS6P53294 YNR077CYNR077C 255 nt-0.72□□□□□ -2.52
PUS6P53294 YOR309CYOR309C 381 nt-0.77□□□□□ -2.53
PUS6P53294 YBR223W-AYBR223W-A 120 nt-0.91□□□□□ -2.56
PUS6P53294 tY(GUA)QtY(GUA)Q 84 nt-1.05□□□□□ -2.58
PUS6P53294 snR87snR87 109 nt-1.08□□□□□ -2.58
PUS6P53294 YBR126W-BYBR126W-B 144 nt-1.51□□□□□ -2.65
PUS6P53294 YDR543CYDR543C 300 nt-2.03□□□□□ -2.73
PUS6P53294 YOL166W-AYOL166W-A 156 nt-2.3□□□□□ -2.78
PUS6P53294 YJR162CYJR162C 351 nt-2.75□□□□□ -2.85
PUS6P53294 YJL136W-AYJL136W-A 84 nt-2.86□□□□□ -2.87
Retrieved 29 of 7,029 protein–RNA pairs in 3.2 ms