Protein–RNA interactions for Protein: P53148

SPC105, Spindle pole body component SPC105, yeastyeast

Predictions only

Length 917 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC105P53148 tP(UGG)QtP(UGG)Q 72 nt-0.92□□□□□ -2.56
SPC105P53148 YBR223W-AYBR223W-A 120 nt-0.92□□□□□ -2.56
SPC105P53148 snR64snR64 101 nt-0.93□□□□□ -2.56
SPC105P53148 snR77snR77 88 nt-1.14□□□□□ -2.59
SPC105P53148 YDL159W-AYDL159W-A 132 nt-1.16□□□□□ -2.6
SPC105P53148 YGR122C-AYGR122C-A 129 nt-1.17□□□□□ -2.6
SPC105P53148 CDC65tQ(CUG)M 72 nt-1.17□□□□□ -2.6
SPC105P53148 snR53snR53 91 nt-1.2□□□□□ -2.6
SPC105P53148 YDL114W-AYDL114W-A 114 nt-1.21□□□□□ -2.6
SPC105P53148 tV(UAC)QtV(UAC)Q 76 nt-1.23□□□□□ -2.61
SPC105P53148 tY(GUA)QtY(GUA)Q 84 nt-1.34□□□□□ -2.62
SPC105P53148 YMR315W-AYMR315W-A 108 nt-1.36□□□□□ -2.63
SPC105P53148 YLR149C-AYLR149C-A 87 nt-1.57□□□□□ -2.66
SPC105P53148 YOR309CYOR309C 381 nt-1.59□□□□□ -2.66
SPC105P53148 snR6snR6 112 nt-1.62□□□□□ -2.67
SPC105P53148 YOR335W-AYOR335W-A 81 nt-1.71□□□□□ -2.68
SPC105P53148 RPL41BYDL133C-A 78 nt-1.73□□□□□ -2.69
SPC105P53148 snR73snR73 106 nt-1.86□□□□□ -2.71
SPC105P53148 YKL096C-BYKL096C-B 150 nt-1.95□□□□□ -2.72
SPC105P53148 YBR126W-BYBR126W-B 144 nt-1.96□□□□□ -2.72
SPC105P53148 YOL166W-AYOL166W-A 156 nt-2□□□□□ -2.73
SPC105P53148 YDR543CYDR543C 300 nt-2.08□□□□□ -2.74
SPC105P53148 snR40snR40 97 nt-2.28□□□□□ -2.77
SPC105P53148 snR58snR58 96 nt-2.52□□□□□ -2.81
SPC105P53148 snR87snR87 109 nt-2.61□□□□□ -2.83
SPC105P53148 snR75snR75 89 nt-2.63□□□□□ -2.83
SPC105P53148 tC(GCA)QtC(GCA)Q 76 nt-2.75□□□□□ -2.85
SPC105P53148 YJR162CYJR162C 351 nt-3.21□□□□□ -2.92
SPC105P53148 YJL136W-AYJL136W-A 84 nt-3.59□□□□□ -2.98
Retrieved 29 of 7,029 protein–RNA pairs in 7.2 ms