Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 snR85snR85 171 nt-2.91□□□□□ -2.88
USE1P53146 snR62snR62 100 nt-2.99□□□□□ -2.89
USE1P53146 YDR543CYDR543C 300 nt-3.07□□□□□ -2.9
USE1P53146 YGR122C-AYGR122C-A 129 nt-3.07□□□□□ -2.9
USE1P53146 YDL159W-AYDL159W-A 132 nt-3.08□□□□□ -2.9
USE1P53146 YNL170WYNL170W 396 nt-3.11□□□□□ -2.91
USE1P53146 snR64snR64 101 nt-3.19□□□□□ -2.92
USE1P53146 YDR524C-AYDR524C-A 120 nt-3.22□□□□□ -2.92
USE1P53146 YLR294CYLR294C 330 nt-3.29□□□□□ -2.94
USE1P53146 YOR225WYOR225W 330 nt-3.38□□□□□ -2.95
USE1P53146 YKL096C-BYKL096C-B 150 nt-3.47□□□□□ -2.96
USE1P53146 YOL166W-AYOL166W-A 156 nt-3.56□□□□□ -2.98
USE1P53146 snR87snR87 109 nt-3.58□□□□□ -2.98
USE1P53146 ATP8Q0080 147 nt-3.61□□□□□ -2.99
USE1P53146 YMR326CYMR326C 309 nt-3.74□□□□□ -3.01
USE1P53146 snR58snR58 96 nt-3.75□□□□□ -3.01
USE1P53146 YHR217CYHR217C 462 nt-3.78□□□□□ -3.01
USE1P53146 snR53snR53 91 nt-3.78□□□□□ -3.01
USE1P53146 Q0143Q0143 153 nt-3.8□□□□□ -3.02
USE1P53146 YLL066W-BYLL066W-B 171 nt-3.8□□□□□ -3.02
USE1P53146 YLR149C-AYLR149C-A 87 nt-3.92□□□□□ -3.04
USE1P53146 YJR162CYJR162C 351 nt-4.14□□□□□ -3.07
USE1P53146 snR40snR40 97 nt-4.14□□□□□ -3.07
USE1P53146 Q0092Q0092 141 nt-4.19□□□□□ -3.08
USE1P53146 tC(GCA)QtC(GCA)Q 76 nt-4.25□□□□□ -3.09
USE1P53146 YBL109WYBL109W 336 nt-4.27□□□□□ -3.09
USE1P53146 YDL247W-AYDL247W-A 75 nt-4.53□□□□□ -3.13
USE1P53146 YJL136W-AYJL136W-A 84 nt-4.63□□□□□ -3.15
USE1P53146 snR75snR75 89 nt-5.48□□□□□ -3.29
Retrieved 29 of 7,029 protein–RNA pairs in 3 ms