Protein–RNA interactions for Protein: P53078

SDT1, Suppressor of disruption of TFIIS, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDT1P53078 YLR149C-AYLR149C-A 87 nt-0.4□□□□□ -2.47
SDT1P53078 snR33snR33 183 nt-0.54□□□□□ -2.5
SDT1P53078 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
SDT1P53078 tP(UGG)QtP(UGG)Q 72 nt-0.61□□□□□ -2.51
SDT1P53078 YHL009W-BYHL009W-B 5409 nt-0.61□□□□□ -2.51
SDT1P53078 URB1YKL014C 5295 nt-0.65□□□□□ -2.51
SDT1P53078 snR6snR6 112 nt-0.68□□□□□ -2.52
SDT1P53078 YMR315W-AYMR315W-A 108 nt-0.68□□□□□ -2.52
SDT1P53078 YKL096C-BYKL096C-B 150 nt-0.69□□□□□ -2.52
SDT1P53078 tT(UGU)G1tT(UGU)G1 72 nt-0.7□□□□□ -2.52
SDT1P53078 tT(UGU)G2tT(UGU)G2 72 nt-0.7□□□□□ -2.52
SDT1P53078 tT(UGU)PtT(UGU)P 72 nt-0.7□□□□□ -2.52
SDT1P53078 YOR335W-AYOR335W-A 81 nt-0.7□□□□□ -2.52
SDT1P53078 snR73snR73 106 nt-0.84□□□□□ -2.54
SDT1P53078 RPL41BYDL133C-A 78 nt-0.87□□□□□ -2.55
SDT1P53078 YOR309CYOR309C 381 nt-0.87□□□□□ -2.55
SDT1P53078 snR40snR40 97 nt-0.9□□□□□ -2.55
SDT1P53078 snR75snR75 89 nt-0.96□□□□□ -2.56
SDT1P53078 tY(GUA)QtY(GUA)Q 84 nt-1.04□□□□□ -2.58
SDT1P53078 YBR223W-AYBR223W-A 120 nt-1.06□□□□□ -2.58
SDT1P53078 snR58snR58 96 nt-1.35□□□□□ -2.63
SDT1P53078 snR87snR87 109 nt-1.38□□□□□ -2.63
SDT1P53078 tC(GCA)QtC(GCA)Q 76 nt-1.4□□□□□ -2.63
SDT1P53078 YNR077CYNR077C 255 nt-1.42□□□□□ -2.64
SDT1P53078 YBR126W-BYBR126W-B 144 nt-1.73□□□□□ -2.69
SDT1P53078 YDR543CYDR543C 300 nt-2.4□□□□□ -2.79
SDT1P53078 YJL136W-AYJL136W-A 84 nt-2.66□□□□□ -2.84
SDT1P53078 YOL166W-AYOL166W-A 156 nt-2.91□□□□□ -2.88
SDT1P53078 YJR162CYJR162C 351 nt-3.35□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 16.6 ms