Protein–RNA interactions for Protein: P51979

HFM1, ATP-dependent DNA helicase MER3, yeastyeast

Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HFM1P51979 snR77snR77 88 nt-0.05□□□□□ -2.42
HFM1P51979 snR161snR161 161 nt-0.13□□□□□ -2.43
HFM1P51979 YJL113WYJL113W 4647 nt-0.19□□□□□ -2.44
HFM1P51979 URB1YKL014C 5295 nt-0.39□□□□□ -2.47
HFM1P51979 snR40snR40 97 nt-0.46□□□□□ -2.48
HFM1P51979 YHL009W-BYHL009W-B 5409 nt-0.51□□□□□ -2.49
HFM1P51979 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
HFM1P51979 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
HFM1P51979 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
HFM1P51979 YNR077CYNR077C 255 nt-0.58□□□□□ -2.5
HFM1P51979 RPL41BYDL133C-A 78 nt-0.59□□□□□ -2.5
HFM1P51979 CDC65tQ(CUG)M 72 nt-0.59□□□□□ -2.5
HFM1P51979 snR33snR33 183 nt-0.65□□□□□ -2.51
HFM1P51979 snR6snR6 112 nt-0.66□□□□□ -2.52
HFM1P51979 YOR335W-AYOR335W-A 81 nt-0.66□□□□□ -2.52
HFM1P51979 YMR315W-AYMR315W-A 108 nt-0.69□□□□□ -2.52
HFM1P51979 YBR223W-AYBR223W-A 120 nt-0.71□□□□□ -2.52
HFM1P51979 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
HFM1P51979 snR73snR73 106 nt-0.85□□□□□ -2.55
HFM1P51979 YOR309CYOR309C 381 nt-1.07□□□□□ -2.58
HFM1P51979 snR58snR58 96 nt-1.12□□□□□ -2.59
HFM1P51979 tC(GCA)QtC(GCA)Q 76 nt-1.14□□□□□ -2.59
HFM1P51979 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
HFM1P51979 YOL166W-AYOL166W-A 156 nt-1.53□□□□□ -2.65
HFM1P51979 snR87snR87 109 nt-1.58□□□□□ -2.66
HFM1P51979 YBR126W-BYBR126W-B 144 nt-1.62□□□□□ -2.67
HFM1P51979 YDR543CYDR543C 300 nt-1.65□□□□□ -2.67
HFM1P51979 YJR162CYJR162C 351 nt-2.53□□□□□ -2.81
HFM1P51979 YJL136W-AYJL136W-A 84 nt-3.28□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 63.5 ms