Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 snR40snR40 97 nt0.26□□□□□ -2.37
SPT20P50875 YJL113WYJL113W 4647 nt0.19□□□□□ -2.38
SPT20P50875 tA(UGC)QtA(UGC)Q 76 nt0.18□□□□□ -2.38
SPT20P50875 snR161snR161 161 nt0.05□□□□□ -2.4
SPT20P50875 snR6snR6 112 nt-0.15□□□□□ -2.43
SPT20P50875 YOR335W-AYOR335W-A 81 nt-0.16□□□□□ -2.44
SPT20P50875 RPL41BYDL133C-A 78 nt-0.22□□□□□ -2.44
SPT20P50875 YHL009W-BYHL009W-B 5409 nt-0.26□□□□□ -2.45
SPT20P50875 CDC65tQ(CUG)M 72 nt-0.27□□□□□ -2.45
SPT20P50875 snR73snR73 106 nt-0.33□□□□□ -2.46
SPT20P50875 URB1YKL014C 5295 nt-0.36□□□□□ -2.47
SPT20P50875 YMR315W-AYMR315W-A 108 nt-0.4□□□□□ -2.47
SPT20P50875 tC(GCA)QtC(GCA)Q 76 nt-0.46□□□□□ -2.48
SPT20P50875 snR58snR58 96 nt-0.53□□□□□ -2.49
SPT20P50875 snR33snR33 183 nt-0.54□□□□□ -2.5
SPT20P50875 tP(UGG)QtP(UGG)Q 72 nt-0.57□□□□□ -2.5
SPT20P50875 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
SPT20P50875 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
SPT20P50875 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
SPT20P50875 YOR309CYOR309C 381 nt-0.66□□□□□ -2.52
SPT20P50875 YNR077CYNR077C 255 nt-0.71□□□□□ -2.52
SPT20P50875 YBR223W-AYBR223W-A 120 nt-0.9□□□□□ -2.55
SPT20P50875 snR87snR87 109 nt-0.95□□□□□ -2.56
SPT20P50875 tY(GUA)QtY(GUA)Q 84 nt-1.02□□□□□ -2.57
SPT20P50875 YBR126W-BYBR126W-B 144 nt-1.72□□□□□ -2.68
SPT20P50875 YDR543CYDR543C 300 nt-2.04□□□□□ -2.74
SPT20P50875 YOL166W-AYOL166W-A 156 nt-2.11□□□□□ -2.75
SPT20P50875 YJL136W-AYJL136W-A 84 nt-2.56□□□□□ -2.82
SPT20P50875 YJR162CYJR162C 351 nt-2.91□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 25.9 ms