Protein–RNA interactions for Protein: P50079

HSV2, SVP1-like protein 2, yeastyeast

Predicted RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSV2P50079 snR161snR161 161 nt-0.2□□□□□ -2.44
HSV2P50079 YJL113WYJL113W 4647 nt-0.29□□□□□ -2.46
HSV2P50079 snR75snR75 89 nt-0.33□□□□□ -2.46
HSV2P50079 YHL009W-BYHL009W-B 5409 nt-0.45□□□□□ -2.48
HSV2P50079 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
HSV2P50079 CDC65tQ(CUG)M 72 nt-0.55□□□□□ -2.5
HSV2P50079 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
HSV2P50079 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
HSV2P50079 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
HSV2P50079 snR40snR40 97 nt-0.57□□□□□ -2.5
HSV2P50079 snR6snR6 112 nt-0.58□□□□□ -2.5
HSV2P50079 YNR077CYNR077C 255 nt-0.61□□□□□ -2.51
HSV2P50079 YOR335W-AYOR335W-A 81 nt-0.62□□□□□ -2.51
HSV2P50079 snR33snR33 183 nt-0.65□□□□□ -2.51
HSV2P50079 YMR315W-AYMR315W-A 108 nt-0.7□□□□□ -2.52
HSV2P50079 RPL41BYDL133C-A 78 nt-0.74□□□□□ -2.53
HSV2P50079 tP(UGG)QtP(UGG)Q 72 nt-0.74□□□□□ -2.53
HSV2P50079 snR73snR73 106 nt-0.79□□□□□ -2.54
HSV2P50079 YBR223W-AYBR223W-A 120 nt-0.81□□□□□ -2.54
HSV2P50079 YOR309CYOR309C 381 nt-0.98□□□□□ -2.57
HSV2P50079 snR58snR58 96 nt-1.22□□□□□ -2.6
HSV2P50079 tC(GCA)QtC(GCA)Q 76 nt-1.24□□□□□ -2.61
HSV2P50079 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
HSV2P50079 snR87snR87 109 nt-1.49□□□□□ -2.65
HSV2P50079 YBR126W-BYBR126W-B 144 nt-1.59□□□□□ -2.66
HSV2P50079 YOL166W-AYOL166W-A 156 nt-1.79□□□□□ -2.7
HSV2P50079 YDR543CYDR543C 300 nt-1.84□□□□□ -2.7
HSV2P50079 YJR162CYJR162C 351 nt-2.65□□□□□ -2.83
HSV2P50079 YJL136W-AYJL136W-A 84 nt-3.17□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 4.1 ms