Protein–RNA interactions for Protein: P47977

TIS11, mRNA decay factor CTH2, yeastyeast

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIS11P47977 tV(UAC)QtV(UAC)Q 76 nt-0.41□□□□□ -2.48
TIS11P47977 URB1YKL014C 5295 nt-0.41□□□□□ -2.48
TIS11P47977 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
TIS11P47977 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
TIS11P47977 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
TIS11P47977 snR33snR33 183 nt-0.51□□□□□ -2.49
TIS11P47977 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
TIS11P47977 YKL096C-BYKL096C-B 150 nt-0.57□□□□□ -2.5
TIS11P47977 CDC65tQ(CUG)M 72 nt-0.58□□□□□ -2.5
TIS11P47977 tP(UGG)QtP(UGG)Q 72 nt-0.64□□□□□ -2.51
TIS11P47977 YMR315W-AYMR315W-A 108 nt-0.65□□□□□ -2.51
TIS11P47977 YBR223W-AYBR223W-A 120 nt-0.7□□□□□ -2.52
TIS11P47977 RPL41BYDL133C-A 78 nt-0.71□□□□□ -2.52
TIS11P47977 snR6snR6 112 nt-0.75□□□□□ -2.53
TIS11P47977 YOR335W-AYOR335W-A 81 nt-0.75□□□□□ -2.53
TIS11P47977 YNR077CYNR077C 255 nt-0.78□□□□□ -2.53
TIS11P47977 snR75snR75 89 nt-0.83□□□□□ -2.54
TIS11P47977 snR40snR40 97 nt-0.85□□□□□ -2.55
TIS11P47977 snR73snR73 106 nt-0.87□□□□□ -2.55
TIS11P47977 YOR309CYOR309C 381 nt-0.92□□□□□ -2.56
TIS11P47977 tY(GUA)QtY(GUA)Q 84 nt-0.99□□□□□ -2.57
TIS11P47977 snR58snR58 96 nt-1.17□□□□□ -2.6
TIS11P47977 tC(GCA)QtC(GCA)Q 76 nt-1.25□□□□□ -2.61
TIS11P47977 YBR126W-BYBR126W-B 144 nt-1.37□□□□□ -2.63
TIS11P47977 snR87snR87 109 nt-1.4□□□□□ -2.63
TIS11P47977 YDR543CYDR543C 300 nt-1.57□□□□□ -2.66
TIS11P47977 YOL166W-AYOL166W-A 156 nt-1.75□□□□□ -2.69
TIS11P47977 YJR162CYJR162C 351 nt-2.31□□□□□ -2.78
TIS11P47977 YJL136W-AYJL136W-A 84 nt-2.54□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 6.1 ms