Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 snR77snR77 88 nt-0.42□□□□□ -2.48
TY4A-JP47023 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
TY4A-JP47023 YHL009W-BYHL009W-B 5409 nt-0.59□□□□□ -2.5
TY4A-JP47023 YKL096C-BYKL096C-B 150 nt-0.6□□□□□ -2.51
TY4A-JP47023 snR33snR33 183 nt-0.68□□□□□ -2.52
TY4A-JP47023 CDC65tQ(CUG)M 72 nt-0.69□□□□□ -2.52
TY4A-JP47023 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
TY4A-JP47023 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
TY4A-JP47023 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
TY4A-JP47023 YNR077CYNR077C 255 nt-0.72□□□□□ -2.52
TY4A-JP47023 tP(UGG)QtP(UGG)Q 72 nt-0.82□□□□□ -2.54
TY4A-JP47023 YMR315W-AYMR315W-A 108 nt-0.83□□□□□ -2.54
TY4A-JP47023 snR6snR6 112 nt-0.85□□□□□ -2.55
TY4A-JP47023 YOR335W-AYOR335W-A 81 nt-0.88□□□□□ -2.55
TY4A-JP47023 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
TY4A-JP47023 RPL41BYDL133C-A 78 nt-0.97□□□□□ -2.56
TY4A-JP47023 snR75snR75 89 nt-0.98□□□□□ -2.57
TY4A-JP47023 snR40snR40 97 nt-1.03□□□□□ -2.57
TY4A-JP47023 snR73snR73 106 nt-1.04□□□□□ -2.58
TY4A-JP47023 YOR309CYOR309C 381 nt-1.13□□□□□ -2.59
TY4A-JP47023 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
TY4A-JP47023 snR58snR58 96 nt-1.52□□□□□ -2.65
TY4A-JP47023 tC(GCA)QtC(GCA)Q 76 nt-1.58□□□□□ -2.66
TY4A-JP47023 snR87snR87 109 nt-1.74□□□□□ -2.69
TY4A-JP47023 YOL166W-AYOL166W-A 156 nt-1.94□□□□□ -2.72
TY4A-JP47023 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
TY4A-JP47023 YDR543CYDR543C 300 nt-2.05□□□□□ -2.74
TY4A-JP47023 YJR162CYJR162C 351 nt-3.15□□□□□ -2.91
TY4A-JP47023 YJL136W-AYJL136W-A 84 nt-3.36□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 23.8 ms