Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 snR161snR161 161 nt-0.16□□□□□ -2.44
NMD5P46970 snR75snR75 89 nt-0.34□□□□□ -2.46
NMD5P46970 YJL113WYJL113W 4647 nt-0.39□□□□□ -2.47
NMD5P46970 URB1YKL014C 5295 nt-0.43□□□□□ -2.48
NMD5P46970 CDC65tQ(CUG)M 72 nt-0.52□□□□□ -2.49
NMD5P46970 snR40snR40 97 nt-0.55□□□□□ -2.5
NMD5P46970 YOR335W-AYOR335W-A 81 nt-0.57□□□□□ -2.5
NMD5P46970 snR33snR33 183 nt-0.57□□□□□ -2.5
NMD5P46970 snR6snR6 112 nt-0.6□□□□□ -2.51
NMD5P46970 YMR315W-AYMR315W-A 108 nt-0.61□□□□□ -2.51
NMD5P46970 RPL41BYDL133C-A 78 nt-0.64□□□□□ -2.51
NMD5P46970 tP(UGG)QtP(UGG)Q 72 nt-0.65□□□□□ -2.51
NMD5P46970 YHL009W-BYHL009W-B 5409 nt-0.71□□□□□ -2.52
NMD5P46970 snR73snR73 106 nt-0.75□□□□□ -2.53
NMD5P46970 YNR077CYNR077C 255 nt-0.76□□□□□ -2.53
NMD5P46970 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
NMD5P46970 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
NMD5P46970 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
NMD5P46970 YOR309CYOR309C 381 nt-0.88□□□□□ -2.55
NMD5P46970 YBR223W-AYBR223W-A 120 nt-0.96□□□□□ -2.56
NMD5P46970 tY(GUA)QtY(GUA)Q 84 nt-1.1□□□□□ -2.59
NMD5P46970 snR58snR58 96 nt-1.13□□□□□ -2.59
NMD5P46970 tC(GCA)QtC(GCA)Q 76 nt-1.13□□□□□ -2.59
NMD5P46970 snR87snR87 109 nt-1.35□□□□□ -2.63
NMD5P46970 YBR126W-BYBR126W-B 144 nt-1.91□□□□□ -2.72
NMD5P46970 YOL166W-AYOL166W-A 156 nt-2.04□□□□□ -2.74
NMD5P46970 YDR543CYDR543C 300 nt-2.2□□□□□ -2.76
NMD5P46970 YJL136W-AYJL136W-A 84 nt-2.82□□□□□ -2.86
NMD5P46970 YJR162CYJR162C 351 nt-3.39□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 35.7 ms