Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YOR316C-AYOR316C-A 210 nt-0.8□□□□□ -2.54
RPN11P43588 YDL159W-AYDL159W-A 132 nt-0.82□□□□□ -2.54
RPN11P43588 tP(UGG)QtP(UGG)Q 72 nt-0.88□□□□□ -2.55
RPN11P43588 snR77snR77 88 nt-0.91□□□□□ -2.56
RPN11P43588 YGR122C-AYGR122C-A 129 nt-0.91□□□□□ -2.56
RPN11P43588 CDC65tQ(CUG)M 72 nt-0.97□□□□□ -2.56
RPN11P43588 YDL114W-AYDL114W-A 114 nt-1□□□□□ -2.57
RPN11P43588 YBR223W-AYBR223W-A 120 nt-1.04□□□□□ -2.58
RPN11P43588 tV(UAC)QtV(UAC)Q 76 nt-1.1□□□□□ -2.59
RPN11P43588 snR53snR53 91 nt-1.11□□□□□ -2.59
RPN11P43588 YMR315W-AYMR315W-A 108 nt-1.12□□□□□ -2.59
RPN11P43588 tY(GUA)QtY(GUA)Q 84 nt-1.26□□□□□ -2.61
RPN11P43588 YLR149C-AYLR149C-A 87 nt-1.36□□□□□ -2.63
RPN11P43588 YOR309CYOR309C 381 nt-1.36□□□□□ -2.63
RPN11P43588 snR6snR6 112 nt-1.37□□□□□ -2.63
RPN11P43588 YOR335W-AYOR335W-A 81 nt-1.4□□□□□ -2.63
RPN11P43588 RPL41BYDL133C-A 78 nt-1.46□□□□□ -2.64
RPN11P43588 snR73snR73 106 nt-1.56□□□□□ -2.66
RPN11P43588 YKL096C-BYKL096C-B 150 nt-1.75□□□□□ -2.69
RPN11P43588 snR40snR40 97 nt-1.88□□□□□ -2.71
RPN11P43588 YBR126W-BYBR126W-B 144 nt-1.9□□□□□ -2.71
RPN11P43588 YOL166W-AYOL166W-A 156 nt-2.16□□□□□ -2.76
RPN11P43588 snR87snR87 109 nt-2.17□□□□□ -2.76
RPN11P43588 snR75snR75 89 nt-2.21□□□□□ -2.76
RPN11P43588 snR58snR58 96 nt-2.26□□□□□ -2.77
RPN11P43588 YDR543CYDR543C 300 nt-2.38□□□□□ -2.79
RPN11P43588 tC(GCA)QtC(GCA)Q 76 nt-2.43□□□□□ -2.8
RPN11P43588 YJL136W-AYJL136W-A 84 nt-3.4□□□□□ -2.95
RPN11P43588 YJR162CYJR162C 351 nt-3.47□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 8.3 ms