Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YHL009W-B	YHL009W-B	5409 nt		-0.72	□□□□□ -2.52
CAF16	P43569	snR77	snR77	88 nt		-0.74	□□□□□ -2.53
CAF16	P43569	tT(UGU)G1	tT(UGU)G1	72 nt		-0.8	□□□□□ -2.54
CAF16	P43569	tT(UGU)G2	tT(UGU)G2	72 nt		-0.8	□□□□□ -2.54
CAF16	P43569	tT(UGU)P	tT(UGU)P	72 nt		-0.8	□□□□□ -2.54
CAF16	P43569	tV(UAC)Q	tV(UAC)Q	76 nt		-0.8	□□□□□ -2.54
CAF16	P43569	tP(UGG)Q	tP(UGG)Q	72 nt		-0.85	□□□□□ -2.55
CAF16	P43569	YLR149C-A	YLR149C-A	87 nt		-0.88	□□□□□ -2.55
CAF16	P43569	CDC65	tQ(CUG)M	72 nt		-0.99	□□□□□ -2.57
CAF16	P43569	YMR315W-A	YMR315W-A	108 nt		-1.09	□□□□□ -2.58
CAF16	P43569	YNR077C	YNR077C	255 nt		-1.1	□□□□□ -2.59
CAF16	P43569	YBR223W-A	YBR223W-A	120 nt		-1.13	□□□□□ -2.59
CAF16	P43569	YKL096C-B	YKL096C-B	150 nt		-1.16	□□□□□ -2.6
CAF16	P43569	tY(GUA)Q	tY(GUA)Q	84 nt		-1.25	□□□□□ -2.61
CAF16	P43569	snR6	snR6	112 nt		-1.31	□□□□□ -2.62
CAF16	P43569	RPL41B	YDL133C-A	78 nt		-1.31	□□□□□ -2.62
CAF16	P43569	YOR335W-A	YOR335W-A	81 nt		-1.32	□□□□□ -2.62
CAF16	P43569	YOR309C	YOR309C	381 nt		-1.36	□□□□□ -2.63
CAF16	P43569	snR73	snR73	106 nt		-1.52	□□□□□ -2.65
CAF16	P43569	snR40	snR40	97 nt		-1.6	□□□□□ -2.67
CAF16	P43569	snR75	snR75	89 nt		-1.67	□□□□□ -2.68
CAF16	P43569	YBR126W-B	YBR126W-B	144 nt		-1.93	□□□□□ -2.72
CAF16	P43569	snR58	snR58	96 nt		-2.06	□□□□□ -2.74
CAF16	P43569	snR87	snR87	109 nt		-2.17	□□□□□ -2.76
CAF16	P43569	tC(GCA)Q	tC(GCA)Q	76 nt		-2.2	□□□□□ -2.76
CAF16	P43569	YDR543C	YDR543C	300 nt		-2.56	□□□□□ -2.82
CAF16	P43569	YOL166W-A	YOL166W-A	156 nt		-2.66	□□□□□ -2.84
CAF16	P43569	YJL136W-A	YJL136W-A	84 nt		-3.31	□□□□□ -2.94
CAF16	P43569	YJR162C	YJR162C	351 nt		-3.66	□□□□□ -3

Retrieved 29 of 7,029 protein–RNA pairs in 795.1 ms