Protein–RNA interactions for Protein: P43554

SWP82, SWI/SNF global transcription activator complex subunit SWP82, yeastyeast

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWP82P43554 snR77snR77 88 nt-1□□□□□ -2.57
SWP82P43554 YGR122C-AYGR122C-A 129 nt-1□□□□□ -2.57
SWP82P43554 YBR223W-AYBR223W-A 120 nt-1□□□□□ -2.57
SWP82P43554 YDL159W-AYDL159W-A 132 nt-1.01□□□□□ -2.57
SWP82P43554 YDL114W-AYDL114W-A 114 nt-1.04□□□□□ -2.58
SWP82P43554 tP(UGG)QtP(UGG)Q 72 nt-1.04□□□□□ -2.58
SWP82P43554 CDC65tQ(CUG)M 72 nt-1.07□□□□□ -2.58
SWP82P43554 YNR077CYNR077C 255 nt-1.07□□□□□ -2.58
SWP82P43554 snR53snR53 91 nt-1.1□□□□□ -2.59
SWP82P43554 tV(UAC)QtV(UAC)Q 76 nt-1.14□□□□□ -2.59
SWP82P43554 YMR315W-AYMR315W-A 108 nt-1.21□□□□□ -2.6
SWP82P43554 tY(GUA)QtY(GUA)Q 84 nt-1.41□□□□□ -2.64
SWP82P43554 YLR149C-AYLR149C-A 87 nt-1.42□□□□□ -2.64
SWP82P43554 RPL41BYDL133C-A 78 nt-1.44□□□□□ -2.64
SWP82P43554 snR6snR6 112 nt-1.48□□□□□ -2.65
SWP82P43554 YOR335W-AYOR335W-A 81 nt-1.53□□□□□ -2.65
SWP82P43554 YOR309CYOR309C 381 nt-1.61□□□□□ -2.67
SWP82P43554 snR73snR73 106 nt-1.67□□□□□ -2.68
SWP82P43554 YKL096C-BYKL096C-B 150 nt-1.73□□□□□ -2.69
SWP82P43554 YBR126W-BYBR126W-B 144 nt-1.87□□□□□ -2.71
SWP82P43554 snR40snR40 97 nt-1.97□□□□□ -2.72
SWP82P43554 snR58snR58 96 nt-2.19□□□□□ -2.76
SWP82P43554 snR75snR75 89 nt-2.26□□□□□ -2.77
SWP82P43554 YDR543CYDR543C 300 nt-2.28□□□□□ -2.77
SWP82P43554 tC(GCA)QtC(GCA)Q 76 nt-2.41□□□□□ -2.8
SWP82P43554 YOL166W-AYOL166W-A 156 nt-2.47□□□□□ -2.8
SWP82P43554 snR87snR87 109 nt-2.48□□□□□ -2.81
SWP82P43554 YJR162CYJR162C 351 nt-3.24□□□□□ -2.93
SWP82P43554 YJL136W-AYJL136W-A 84 nt-3.89□□□□□ -3.03
Retrieved 29 of 7,029 protein–RNA pairs in 3.9 ms