Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CTSKP43235 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.82■□□□□ 0.76
CTSKP43235 KRT16P5-201ENST00000455284 522 ntBASIC19.82■□□□□ 0.76
CTSKP43235 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CTSKP43235 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSKP43235 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.82■□□□□ 0.76
CTSKP43235 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.82■□□□□ 0.76
CTSKP43235 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.82■□□□□ 0.76
CTSKP43235 AF186192.3-201ENST00000583427 947 ntBASIC19.82■□□□□ 0.76
CTSKP43235 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSKP43235 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSKP43235 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSKP43235 KRT8P36-201ENST00000489121 1440 ntBASIC19.82■□□□□ 0.76
CTSKP43235 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSKP43235 AC027702.1-201ENST00000563810 1770 ntBASIC19.82■□□□□ 0.76
CTSKP43235 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSKP43235 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.82■□□□□ 0.76
CTSKP43235 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.81■□□□□ 0.76
CTSKP43235 HTR7P1-201ENST00000538670 1336 ntBASIC19.81■□□□□ 0.76
CTSKP43235 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTSKP43235 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CTSKP43235 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTSKP43235 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.81■□□□□ 0.76
CTSKP43235 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTSKP43235 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.81■□□□□ 0.76
CTSKP43235 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.81■□□□□ 0.76
CTSKP43235 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.81■□□□□ 0.76
CTSKP43235 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.81■□□□□ 0.76
CTSKP43235 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.81■□□□□ 0.76
CTSKP43235 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.81■□□□□ 0.76
CTSKP43235 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
CTSKP43235 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTSKP43235 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSKP43235 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 NBPF21P-201ENST00000425093 1451 ntBASIC19.8■□□□□ 0.76
CTSKP43235 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CTSKP43235 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.8■□□□□ 0.76
CTSKP43235 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CTSKP43235 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.8■□□□□ 0.76
CTSKP43235 AP003071.4-201ENST00000562276 1284 ntBASIC19.8■□□□□ 0.76
CTSKP43235 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSKP43235 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.8■□□□□ 0.76
CTSKP43235 MIR2861-201ENST00000636310 90 ntBASIC19.8■□□□□ 0.76
CTSKP43235 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 AC124283.5-201ENST00000624661 1809 ntBASIC19.8■□□□□ 0.76
CTSKP43235 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.8■□□□□ 0.76
CTSKP43235 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTSKP43235 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CTSKP43235 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSKP43235 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.79■□□□□ 0.76
CTSKP43235 AL353807.1-201ENST00000427475 662 ntBASIC19.79■□□□□ 0.76
CTSKP43235 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSKP43235 AL353708.3-201ENST00000610272 989 ntBASIC19.79■□□□□ 0.76
CTSKP43235 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CTSKP43235 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.79■□□□□ 0.76
CTSKP43235 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTSKP43235 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.79■□□□□ 0.76
CTSKP43235 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.78■□□□□ 0.76
CTSKP43235 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSKP43235 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSKP43235 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CTSKP43235 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTSKP43235 RCN1P1-201ENST00000400413 996 ntBASIC19.78■□□□□ 0.76
CTSKP43235 AL355355.2-201ENST00000442321 338 ntBASIC19.78■□□□□ 0.76
CTSKP43235 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTSKP43235 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTSKP43235 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSKP43235 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.78■□□□□ 0.76
CTSKP43235 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms