Protein–RNA interactions for Protein: P42900

SLS1, Sigma-like sequence protein 1, mitochondrial, yeastyeast

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLS1P42900 tA(UGC)QtA(UGC)Q 76 nt0.08□□□□□ -2.4
SLS1P42900 snR161snR161 161 nt-0.08□□□□□ -2.42
SLS1P42900 YJL113WYJL113W 4647 nt-0.09□□□□□ -2.42
SLS1P42900 snR40snR40 97 nt-0.29□□□□□ -2.46
SLS1P42900 YHL009W-BYHL009W-B 5409 nt-0.39□□□□□ -2.47
SLS1P42900 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
SLS1P42900 RPL41BYDL133C-A 78 nt-0.5□□□□□ -2.49
SLS1P42900 CDC65tQ(CUG)M 72 nt-0.55□□□□□ -2.5
SLS1P42900 tT(UGU)G1tT(UGU)G1 72 nt-0.56□□□□□ -2.5
SLS1P42900 tT(UGU)G2tT(UGU)G2 72 nt-0.56□□□□□ -2.5
SLS1P42900 tT(UGU)PtT(UGU)P 72 nt-0.56□□□□□ -2.5
SLS1P42900 YOR335W-AYOR335W-A 81 nt-0.58□□□□□ -2.5
SLS1P42900 snR33snR33 183 nt-0.59□□□□□ -2.5
SLS1P42900 snR6snR6 112 nt-0.6□□□□□ -2.51
SLS1P42900 YMR315W-AYMR315W-A 108 nt-0.67□□□□□ -2.52
SLS1P42900 tP(UGG)QtP(UGG)Q 72 nt-0.78□□□□□ -2.53
SLS1P42900 snR73snR73 106 nt-0.79□□□□□ -2.54
SLS1P42900 YBR223W-AYBR223W-A 120 nt-0.84□□□□□ -2.54
SLS1P42900 YNR077CYNR077C 255 nt-0.87□□□□□ -2.55
SLS1P42900 tC(GCA)QtC(GCA)Q 76 nt-1□□□□□ -2.57
SLS1P42900 snR58snR58 96 nt-1.01□□□□□ -2.57
SLS1P42900 YOR309CYOR309C 381 nt-1.06□□□□□ -2.58
SLS1P42900 tY(GUA)QtY(GUA)Q 84 nt-1.12□□□□□ -2.59
SLS1P42900 snR87snR87 109 nt-1.54□□□□□ -2.66
SLS1P42900 YBR126W-BYBR126W-B 144 nt-1.58□□□□□ -2.66
SLS1P42900 YDR543CYDR543C 300 nt-1.88□□□□□ -2.71
SLS1P42900 YOL166W-AYOL166W-A 156 nt-2.12□□□□□ -2.75
SLS1P42900 YJR162CYJR162C 351 nt-2.72□□□□□ -2.84
SLS1P42900 YJL136W-AYJL136W-A 84 nt-3.07□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 30.2 ms