Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeastyeast

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP2P42843 snR161snR161 161 nt-0.11□□□□□ -2.43
SKP2P42843 YJL113WYJL113W 4647 nt-0.13□□□□□ -2.43
SKP2P42843 snR75snR75 89 nt-0.18□□□□□ -2.44
SKP2P42843 snR40snR40 97 nt-0.36□□□□□ -2.47
SKP2P42843 YOR335W-AYOR335W-A 81 nt-0.38□□□□□ -2.47
SKP2P42843 CDC65tQ(CUG)M 72 nt-0.4□□□□□ -2.47
SKP2P42843 snR6snR6 112 nt-0.43□□□□□ -2.48
SKP2P42843 YHL009W-BYHL009W-B 5409 nt-0.44□□□□□ -2.48
SKP2P42843 YMR315W-AYMR315W-A 108 nt-0.46□□□□□ -2.48
SKP2P42843 tP(UGG)QtP(UGG)Q 72 nt-0.47□□□□□ -2.48
SKP2P42843 snR33snR33 183 nt-0.48□□□□□ -2.49
SKP2P42843 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
SKP2P42843 RPL41BYDL133C-A 78 nt-0.53□□□□□ -2.49
SKP2P42843 snR73snR73 106 nt-0.54□□□□□ -2.5
SKP2P42843 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
SKP2P42843 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
SKP2P42843 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
SKP2P42843 YOR309CYOR309C 381 nt-0.66□□□□□ -2.52
SKP2P42843 YNR077CYNR077C 255 nt-0.86□□□□□ -2.55
SKP2P42843 YBR223W-AYBR223W-A 120 nt-0.87□□□□□ -2.55
SKP2P42843 tC(GCA)QtC(GCA)Q 76 nt-0.92□□□□□ -2.56
SKP2P42843 tY(GUA)QtY(GUA)Q 84 nt-0.92□□□□□ -2.56
SKP2P42843 snR58snR58 96 nt-0.96□□□□□ -2.56
SKP2P42843 snR87snR87 109 nt-1.05□□□□□ -2.58
SKP2P42843 YBR126W-BYBR126W-B 144 nt-1.53□□□□□ -2.65
SKP2P42843 YDR543CYDR543C 300 nt-1.96□□□□□ -2.72
SKP2P42843 YOL166W-AYOL166W-A 156 nt-2.27□□□□□ -2.77
SKP2P42843 YJL136W-AYJL136W-A 84 nt-2.32□□□□□ -2.78
SKP2P42843 YJR162CYJR162C 351 nt-2.76□□□□□ -2.85
Retrieved 29 of 7,029 protein–RNA pairs in 48.1 ms