Protein–RNA interactions for Protein: P42838

LEM3, Alkylphosphocholine resistance protein LEM3, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LEM3P42838 snR40snR40 97 nt0.24□□□□□ -2.37
LEM3P42838 tA(UGC)QtA(UGC)Q 76 nt0.17□□□□□ -2.38
LEM3P42838 snR161snR161 161 nt0.06□□□□□ -2.4
LEM3P42838 YJL113WYJL113W 4647 nt-0.15□□□□□ -2.43
LEM3P42838 YOR335W-AYOR335W-A 81 nt-0.17□□□□□ -2.44
LEM3P42838 snR6snR6 112 nt-0.2□□□□□ -2.44
LEM3P42838 RPL41BYDL133C-A 78 nt-0.32□□□□□ -2.46
LEM3P42838 CDC65tQ(CUG)M 72 nt-0.34□□□□□ -2.46
LEM3P42838 snR73snR73 106 nt-0.4□□□□□ -2.47
LEM3P42838 YMR315W-AYMR315W-A 108 nt-0.45□□□□□ -2.48
LEM3P42838 URB1YKL014C 5295 nt-0.52□□□□□ -2.49
LEM3P42838 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
LEM3P42838 tT(UGU)G1tT(UGU)G1 72 nt-0.61□□□□□ -2.51
LEM3P42838 tT(UGU)G2tT(UGU)G2 72 nt-0.61□□□□□ -2.51
LEM3P42838 tT(UGU)PtT(UGU)P 72 nt-0.61□□□□□ -2.51
LEM3P42838 tP(UGG)QtP(UGG)Q 72 nt-0.62□□□□□ -2.51
LEM3P42838 snR33snR33 183 nt-0.62□□□□□ -2.51
LEM3P42838 tC(GCA)QtC(GCA)Q 76 nt-0.64□□□□□ -2.51
LEM3P42838 YOR309CYOR309C 381 nt-0.72□□□□□ -2.52
LEM3P42838 snR58snR58 96 nt-0.77□□□□□ -2.53
LEM3P42838 YBR223W-AYBR223W-A 120 nt-0.88□□□□□ -2.55
LEM3P42838 YNR077CYNR077C 255 nt-1.05□□□□□ -2.58
LEM3P42838 snR87snR87 109 nt-1.1□□□□□ -2.59
LEM3P42838 tY(GUA)QtY(GUA)Q 84 nt-1.2□□□□□ -2.6
LEM3P42838 YBR126W-BYBR126W-B 144 nt-1.66□□□□□ -2.68
LEM3P42838 YDR543CYDR543C 300 nt-1.99□□□□□ -2.73
LEM3P42838 YOL166W-AYOL166W-A 156 nt-2.29□□□□□ -2.78
LEM3P42838 YJR162CYJR162C 351 nt-2.85□□□□□ -2.87
LEM3P42838 YJL136W-AYJL136W-A 84 nt-2.97□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 23.6 ms