Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 YJL113WYJL113W 4647 nt0.4□□□□□ -2.35
MVP1P40959 YOL014WYOL014W 375 nt0.39□□□□□ -2.35
MVP1P40959 tA(UGC)QtA(UGC)Q 76 nt0.35□□□□□ -2.35
MVP1P40959 snR161snR161 161 nt0.29□□□□□ -2.36
MVP1P40959 RPL41BYDL133C-A 78 nt0.13□□□□□ -2.39
MVP1P40959 YOR335W-AYOR335W-A 81 nt0.06□□□□□ -2.4
MVP1P40959 snR6snR6 112 nt0.01□□□□□ -2.41
MVP1P40959 tC(GCA)QtC(GCA)Q 76 nt-0.08□□□□□ -2.42
MVP1P40959 snR73snR73 106 nt-0.21□□□□□ -2.44
MVP1P40959 CDC65tQ(CUG)M 72 nt-0.23□□□□□ -2.45
MVP1P40959 snR58snR58 96 nt-0.26□□□□□ -2.45
MVP1P40959 YMR315W-AYMR315W-A 108 nt-0.32□□□□□ -2.46
MVP1P40959 YHL009W-BYHL009W-B 5409 nt-0.38□□□□□ -2.47
MVP1P40959 URB1YKL014C 5295 nt-0.39□□□□□ -2.47
MVP1P40959 snR33snR33 183 nt-0.66□□□□□ -2.52
MVP1P40959 tP(UGG)QtP(UGG)Q 72 nt-0.7□□□□□ -2.52
MVP1P40959 YOR309CYOR309C 381 nt-0.74□□□□□ -2.53
MVP1P40959 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
MVP1P40959 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
MVP1P40959 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
MVP1P40959 snR87snR87 109 nt-0.99□□□□□ -2.57
MVP1P40959 YBR223W-AYBR223W-A 120 nt-1.21□□□□□ -2.6
MVP1P40959 tY(GUA)QtY(GUA)Q 84 nt-1.27□□□□□ -2.61
MVP1P40959 YNR077CYNR077C 255 nt-1.38□□□□□ -2.63
MVP1P40959 YBR126W-BYBR126W-B 144 nt-2.04□□□□□ -2.74
MVP1P40959 YDR543CYDR543C 300 nt-2.78□□□□□ -2.85
MVP1P40959 YOL166W-AYOL166W-A 156 nt-3.1□□□□□ -2.91
MVP1P40959 YJL136W-AYJL136W-A 84 nt-3.12□□□□□ -2.91
MVP1P40959 YJR162CYJR162C 351 nt-3.82□□□□□ -3.02
Retrieved 29 of 7,029 protein–RNA pairs in 5.1 ms