Protein–RNA interactions for Protein: P40453

UBP7, Ubiquitin carboxyl-terminal hydrolase 7, yeastyeast

Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP7P40453 tA(UGC)QtA(UGC)Q 76 nt0.04□□□□□ -2.4
UBP7P40453 snR40snR40 97 nt0.03□□□□□ -2.4
UBP7P40453 SBH2YER019C-A 267 nt0.02□□□□□ -2.41
UBP7P40453 snR161snR161 161 nt0□□□□□ -2.41
UBP7P40453 YOR335W-AYOR335W-A 81 nt-0.04□□□□□ -2.42
UBP7P40453 snR6snR6 112 nt-0.06□□□□□ -2.42
UBP7P40453 YHL009W-BYHL009W-B 5409 nt-0.08□□□□□ -2.42
UBP7P40453 URB1YKL014C 5295 nt-0.15□□□□□ -2.43
UBP7P40453 snR73snR73 106 nt-0.16□□□□□ -2.44
UBP7P40453 CDC65tQ(CUG)M 72 nt-0.17□□□□□ -2.44
UBP7P40453 tP(UGG)QtP(UGG)Q 72 nt-0.2□□□□□ -2.44
UBP7P40453 YMR315W-AYMR315W-A 108 nt-0.2□□□□□ -2.44
UBP7P40453 YOR309CYOR309C 381 nt-0.27□□□□□ -2.45
UBP7P40453 RPL41BYDL133C-A 78 nt-0.29□□□□□ -2.46
UBP7P40453 snR33snR33 183 nt-0.31□□□□□ -2.46
UBP7P40453 tT(UGU)G1tT(UGU)G1 72 nt-0.37□□□□□ -2.47
UBP7P40453 tT(UGU)G2tT(UGU)G2 72 nt-0.37□□□□□ -2.47
UBP7P40453 tT(UGU)PtT(UGU)P 72 nt-0.37□□□□□ -2.47
UBP7P40453 YNR077CYNR077C 255 nt-0.43□□□□□ -2.48
UBP7P40453 snR87snR87 109 nt-0.48□□□□□ -2.49
UBP7P40453 tC(GCA)QtC(GCA)Q 76 nt-0.49□□□□□ -2.49
UBP7P40453 snR58snR58 96 nt-0.55□□□□□ -2.5
UBP7P40453 tY(GUA)QtY(GUA)Q 84 nt-0.59□□□□□ -2.5
UBP7P40453 YBR223W-AYBR223W-A 120 nt-0.73□□□□□ -2.53
UBP7P40453 YBR126W-BYBR126W-B 144 nt-1.08□□□□□ -2.58
UBP7P40453 YJL136W-AYJL136W-A 84 nt-1.38□□□□□ -2.63
UBP7P40453 YOL166W-AYOL166W-A 156 nt-1.48□□□□□ -2.65
UBP7P40453 YDR543CYDR543C 300 nt-1.62□□□□□ -2.67
UBP7P40453 YJR162CYJR162C 351 nt-2.11□□□□□ -2.75
Retrieved 29 of 7,029 protein–RNA pairs in 3.9 ms