Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 tC(GCA)QtC(GCA)Q 76 nt-4.83□□□□□ -3.18
VTH1P40438 snR64snR64 101 nt-4.96□□□□□ -3.2
VTH1P40438 YOR225WYOR225W 330 nt-4.98□□□□□ -3.21
VTH1P40438 YLR294CYLR294C 330 nt-4.99□□□□□ -3.21
VTH1P40438 YOR231C-AYOR231C-A 201 nt-5.02□□□□□ -3.21
VTH1P40438 snR62snR62 100 nt-5.07□□□□□ -3.22
VTH1P40438 snR40snR40 97 nt-5.13□□□□□ -3.23
VTH1P40438 VAR1Q0140 1197 nt-5.14□□□□□ -3.23
VTH1P40438 YGL041C-BYGL041C-B 183 nt-5.2□□□□□ -3.24
VTH1P40438 YMR046W-AYMR046W-A 129 nt-5.24□□□□□ -3.25
VTH1P40438 YNL103W-AYNL103W-A 90 nt-5.36□□□□□ -3.27
VTH1P40438 snR61snR61 90 nt-5.38□□□□□ -3.27
VTH1P40438 YLR466C-BYLR466C-B 117 nt-5.52□□□□□ -3.29
VTH1P40438 YLR149C-AYLR149C-A 87 nt-5.53□□□□□ -3.29
VTH1P40438 YNL338WYNL338W 159 nt-5.62□□□□□ -3.31
VTH1P40438 snR53snR53 91 nt-5.71□□□□□ -3.32
VTH1P40438 tR(ACG)Q2tR(ACG)Q2 74 nt-5.79□□□□□ -3.34
VTH1P40438 tM(CAU)Q1tM(CAU)Q1 76 nt-5.82□□□□□ -3.34
VTH1P40438 Q0032Q0032 291 nt-5.88□□□□□ -3.35
VTH1P40438 YLL066W-BYLL066W-B 171 nt-6.2□□□□□ -3.4
VTH1P40438 YMR326CYMR326C 309 nt-6.26□□□□□ -3.41
VTH1P40438 Q0143Q0143 153 nt-6.28□□□□□ -3.41
VTH1P40438 YHR217CYHR217C 462 nt-6.6□□□□□ -3.47
VTH1P40438 Q0144Q0144 330 nt-6.75□□□□□ -3.49
VTH1P40438 snR75snR75 89 nt-7.3□□□□□ -3.58
VTH1P40438 ATP8Q0080 147 nt-7.32□□□□□ -3.58
VTH1P40438 YBL109WYBL109W 336 nt-7.49□□□□□ -3.61
VTH1P40438 YDL247W-AYDL247W-A 75 nt-7.56□□□□□ -3.62
VTH1P40438 Q0092Q0092 141 nt-8.33□□□□□ -3.74
Retrieved 29 of 7,029 protein–RNA pairs in 3.9 ms