Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YDR034C-AYDR034C-A 177 nt-3.03□□□□□ -2.89
RTR1P40084 YKL096C-BYKL096C-B 150 nt-3.06□□□□□ -2.9
RTR1P40084 YGL041C-BYGL041C-B 183 nt-3.1□□□□□ -2.91
RTR1P40084 YGL007C-AYGL007C-A 87 nt-3.13□□□□□ -2.91
RTR1P40084 Q0142Q0142 177 nt-3.16□□□□□ -2.92
RTR1P40084 YNL103W-AYNL103W-A 90 nt-3.23□□□□□ -2.93
RTR1P40084 snR62snR62 100 nt-3.24□□□□□ -2.93
RTR1P40084 snR61snR61 90 nt-3.26□□□□□ -2.93
RTR1P40084 snR64snR64 101 nt-3.27□□□□□ -2.93
RTR1P40084 snR58snR58 96 nt-3.28□□□□□ -2.93
RTR1P40084 YNL170WYNL170W 396 nt-3.34□□□□□ -2.94
RTR1P40084 YLR294CYLR294C 330 nt-3.45□□□□□ -2.96
RTR1P40084 Q0032Q0032 291 nt-3.46□□□□□ -2.96
RTR1P40084 YOR225WYOR225W 330 nt-3.5□□□□□ -2.97
RTR1P40084 YJR162CYJR162C 351 nt-3.59□□□□□ -2.98
RTR1P40084 tC(GCA)QtC(GCA)Q 76 nt-3.7□□□□□ -3
RTR1P40084 snR40snR40 97 nt-3.71□□□□□ -3
RTR1P40084 YJL136W-AYJL136W-A 84 nt-3.81□□□□□ -3.02
RTR1P40084 YLR149C-AYLR149C-A 87 nt-3.87□□□□□ -3.03
RTR1P40084 snR53snR53 91 nt-3.92□□□□□ -3.04
RTR1P40084 YLL066W-BYLL066W-B 171 nt-3.97□□□□□ -3.04
RTR1P40084 YHR217CYHR217C 462 nt-4.14□□□□□ -3.07
RTR1P40084 YMR326CYMR326C 309 nt-4.17□□□□□ -3.08
RTR1P40084 ATP8Q0080 147 nt-4.19□□□□□ -3.08
RTR1P40084 Q0143Q0143 153 nt-4.25□□□□□ -3.09
RTR1P40084 YBL109WYBL109W 336 nt-4.6□□□□□ -3.15
RTR1P40084 Q0092Q0092 141 nt-4.84□□□□□ -3.18
RTR1P40084 YDL247W-AYDL247W-A 75 nt-4.88□□□□□ -3.19
RTR1P40084 snR75snR75 89 nt-5.14□□□□□ -3.23
Retrieved 29 of 7,029 protein–RNA pairs in 5.5 ms