Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 snR40snR40 97 nt0.21□□□□□ -2.38
RSP5P39940 tA(UGC)QtA(UGC)Q 76 nt0.13□□□□□ -2.39
RSP5P39940 YJL113WYJL113W 4647 nt0.07□□□□□ -2.4
RSP5P39940 snR161snR161 161 nt0.04□□□□□ -2.4
RSP5P39940 snR6snR6 112 nt-0.07□□□□□ -2.42
RSP5P39940 YOR335W-AYOR335W-A 81 nt-0.08□□□□□ -2.42
RSP5P39940 RPL41BYDL133C-A 78 nt-0.18□□□□□ -2.44
RSP5P39940 CDC65tQ(CUG)M 72 nt-0.18□□□□□ -2.44
RSP5P39940 snR73snR73 106 nt-0.22□□□□□ -2.44
RSP5P39940 URB1YKL014C 5295 nt-0.26□□□□□ -2.45
RSP5P39940 YMR315W-AYMR315W-A 108 nt-0.27□□□□□ -2.45
RSP5P39940 YHL009W-BYHL009W-B 5409 nt-0.28□□□□□ -2.45
RSP5P39940 tC(GCA)QtC(GCA)Q 76 nt-0.35□□□□□ -2.47
RSP5P39940 tP(UGG)QtP(UGG)Q 72 nt-0.4□□□□□ -2.47
RSP5P39940 snR33snR33 183 nt-0.4□□□□□ -2.47
RSP5P39940 snR58snR58 96 nt-0.42□□□□□ -2.48
RSP5P39940 YOR309CYOR309C 381 nt-0.44□□□□□ -2.48
RSP5P39940 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
RSP5P39940 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
RSP5P39940 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
RSP5P39940 snR87snR87 109 nt-0.65□□□□□ -2.51
RSP5P39940 YBR223W-AYBR223W-A 120 nt-0.68□□□□□ -2.52
RSP5P39940 tY(GUA)QtY(GUA)Q 84 nt-0.74□□□□□ -2.53
RSP5P39940 YNR077CYNR077C 255 nt-0.78□□□□□ -2.53
RSP5P39940 YBR126W-BYBR126W-B 144 nt-1.27□□□□□ -2.61
RSP5P39940 YDR543CYDR543C 300 nt-1.58□□□□□ -2.66
RSP5P39940 YOL166W-AYOL166W-A 156 nt-1.73□□□□□ -2.69
RSP5P39940 YJL136W-AYJL136W-A 84 nt-1.86□□□□□ -2.71
RSP5P39940 YJR162CYJR162C 351 nt-2.18□□□□□ -2.76
Retrieved 29 of 7,029 protein–RNA pairs in 4.9 ms