Protein–RNA interactions for Protein: P39709

SEO1, Probable transporter SEO1, yeastyeast

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEO1P39709 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
SEO1P39709 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
SEO1P39709 YDL114W-AYDL114W-A 114 nt-0.67□□□□□ -2.52
SEO1P39709 snR53snR53 91 nt-0.7□□□□□ -2.52
SEO1P39709 tP(UGG)QtP(UGG)Q 72 nt-0.71□□□□□ -2.52
SEO1P39709 CDC65tQ(CUG)M 72 nt-0.72□□□□□ -2.52
SEO1P39709 tV(UAC)QtV(UAC)Q 76 nt-0.72□□□□□ -2.52
SEO1P39709 YHL009W-BYHL009W-B 5409 nt-0.74□□□□□ -2.53
SEO1P39709 YMR315W-AYMR315W-A 108 nt-0.81□□□□□ -2.54
SEO1P39709 YLR149C-AYLR149C-A 87 nt-0.89□□□□□ -2.55
SEO1P39709 YBR223W-AYBR223W-A 120 nt-0.93□□□□□ -2.56
SEO1P39709 snR6snR6 112 nt-0.96□□□□□ -2.56
SEO1P39709 YOR335W-AYOR335W-A 81 nt-0.97□□□□□ -2.56
SEO1P39709 YNR077CYNR077C 255 nt-1□□□□□ -2.57
SEO1P39709 RPL41BYDL133C-A 78 nt-1.02□□□□□ -2.57
SEO1P39709 YOR309CYOR309C 381 nt-1.07□□□□□ -2.58
SEO1P39709 snR73snR73 106 nt-1.1□□□□□ -2.59
SEO1P39709 tY(GUA)QtY(GUA)Q 84 nt-1.11□□□□□ -2.59
SEO1P39709 YKL096C-BYKL096C-B 150 nt-1.17□□□□□ -2.6
SEO1P39709 snR40snR40 97 nt-1.29□□□□□ -2.62
SEO1P39709 snR75snR75 89 nt-1.5□□□□□ -2.65
SEO1P39709 snR58snR58 96 nt-1.57□□□□□ -2.66
SEO1P39709 snR87snR87 109 nt-1.66□□□□□ -2.68
SEO1P39709 tC(GCA)QtC(GCA)Q 76 nt-1.69□□□□□ -2.68
SEO1P39709 YBR126W-BYBR126W-B 144 nt-1.79□□□□□ -2.7
SEO1P39709 YDR543CYDR543C 300 nt-2.08□□□□□ -2.74
SEO1P39709 YOL166W-AYOL166W-A 156 nt-2.26□□□□□ -2.77
SEO1P39709 YJL136W-AYJL136W-A 84 nt-2.87□□□□□ -2.87
SEO1P39709 YJR162CYJR162C 351 nt-3.06□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 4.2 ms