Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 snR77snR77 88 nt-0.63□□□□□ -2.51
VPS8P39702 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
VPS8P39702 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
VPS8P39702 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
VPS8P39702 YHL009W-BYHL009W-B 5409 nt-0.69□□□□□ -2.52
VPS8P39702 tP(UGG)QtP(UGG)Q 72 nt-0.7□□□□□ -2.52
VPS8P39702 tV(UAC)QtV(UAC)Q 76 nt-0.71□□□□□ -2.52
VPS8P39702 CDC65tQ(CUG)M 72 nt-0.76□□□□□ -2.53
VPS8P39702 YLR149C-AYLR149C-A 87 nt-0.83□□□□□ -2.54
VPS8P39702 YMR315W-AYMR315W-A 108 nt-0.84□□□□□ -2.54
VPS8P39702 YNR077CYNR077C 255 nt-0.94□□□□□ -2.56
VPS8P39702 YBR223W-AYBR223W-A 120 nt-0.98□□□□□ -2.57
VPS8P39702 snR6snR6 112 nt-1.01□□□□□ -2.57
VPS8P39702 YOR335W-AYOR335W-A 81 nt-1.01□□□□□ -2.57
VPS8P39702 YKL096C-BYKL096C-B 150 nt-1.03□□□□□ -2.57
VPS8P39702 RPL41BYDL133C-A 78 nt-1.04□□□□□ -2.58
VPS8P39702 tY(GUA)QtY(GUA)Q 84 nt-1.05□□□□□ -2.58
VPS8P39702 YOR309CYOR309C 381 nt-1.13□□□□□ -2.59
VPS8P39702 snR73snR73 106 nt-1.15□□□□□ -2.59
VPS8P39702 snR40snR40 97 nt-1.29□□□□□ -2.62
VPS8P39702 snR75snR75 89 nt-1.43□□□□□ -2.64
VPS8P39702 YBR126W-BYBR126W-B 144 nt-1.6□□□□□ -2.67
VPS8P39702 snR58snR58 96 nt-1.62□□□□□ -2.67
VPS8P39702 tC(GCA)QtC(GCA)Q 76 nt-1.74□□□□□ -2.69
VPS8P39702 snR87snR87 109 nt-1.77□□□□□ -2.69
VPS8P39702 YDR543CYDR543C 300 nt-2.22□□□□□ -2.76
VPS8P39702 YOL166W-AYOL166W-A 156 nt-2.46□□□□□ -2.8
VPS8P39702 YJL136W-AYJL136W-A 84 nt-2.77□□□□□ -2.85
VPS8P39702 YJR162CYJR162C 351 nt-3.01□□□□□ -2.89
Retrieved 29 of 7,029 protein–RNA pairs in 22.2 ms