Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 YDL114W-AYDL114W-A 114 nt-0.64□□□□□ -2.51
RRP8P38961 YHL009W-BYHL009W-B 5409 nt-0.65□□□□□ -2.51
RRP8P38961 YLR149C-AYLR149C-A 87 nt-0.71□□□□□ -2.52
RRP8P38961 snR33snR33 183 nt-0.75□□□□□ -2.53
RRP8P38961 CDC65tQ(CUG)M 72 nt-0.81□□□□□ -2.54
RRP8P38961 tT(UGU)G1tT(UGU)G1 72 nt-0.81□□□□□ -2.54
RRP8P38961 tT(UGU)G2tT(UGU)G2 72 nt-0.81□□□□□ -2.54
RRP8P38961 tT(UGU)PtT(UGU)P 72 nt-0.81□□□□□ -2.54
RRP8P38961 tP(UGG)QtP(UGG)Q 72 nt-0.89□□□□□ -2.55
RRP8P38961 YMR315W-AYMR315W-A 108 nt-0.99□□□□□ -2.57
RRP8P38961 snR6snR6 112 nt-1.01□□□□□ -2.57
RRP8P38961 YOR335W-AYOR335W-A 81 nt-1.06□□□□□ -2.58
RRP8P38961 YKL096C-BYKL096C-B 150 nt-1.09□□□□□ -2.58
RRP8P38961 YBR223W-AYBR223W-A 120 nt-1.11□□□□□ -2.59
RRP8P38961 YNR077CYNR077C 255 nt-1.22□□□□□ -2.6
RRP8P38961 snR73snR73 106 nt-1.23□□□□□ -2.61
RRP8P38961 YOR309CYOR309C 381 nt-1.26□□□□□ -2.61
RRP8P38961 RPL41BYDL133C-A 78 nt-1.27□□□□□ -2.61
RRP8P38961 snR40snR40 97 nt-1.38□□□□□ -2.63
RRP8P38961 tY(GUA)QtY(GUA)Q 84 nt-1.43□□□□□ -2.64
RRP8P38961 snR75snR75 89 nt-1.52□□□□□ -2.65
RRP8P38961 snR58snR58 96 nt-1.89□□□□□ -2.71
RRP8P38961 snR87snR87 109 nt-1.99□□□□□ -2.73
RRP8P38961 tC(GCA)QtC(GCA)Q 76 nt-2□□□□□ -2.73
RRP8P38961 YBR126W-BYBR126W-B 144 nt-2.17□□□□□ -2.76
RRP8P38961 YDR543CYDR543C 300 nt-2.54□□□□□ -2.82
RRP8P38961 YOL166W-AYOL166W-A 156 nt-2.87□□□□□ -2.87
RRP8P38961 YJR162CYJR162C 351 nt-3.69□□□□□ -3
RRP8P38961 YJL136W-AYJL136W-A 84 nt-3.73□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 3.7 ms