Protein–RNA interactions for Protein: P38889

SKN7, Transcription factor SKN7, yeastyeast

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN7P38889 RPL41BYDL133C-A 78 nt0.52□□□□□ -2.33
SKN7P38889 YOL014WYOL014W 375 nt0.52□□□□□ -2.33
SKN7P38889 snR161snR161 161 nt0.47□□□□□ -2.33
SKN7P38889 FMP27YLR454W 7887 nt0.47□□□□□ -2.33
SKN7P38889 snR6snR6 112 nt0.46□□□□□ -2.34
SKN7P38889 tA(UGC)QtA(UGC)Q 76 nt0.4□□□□□ -2.35
SKN7P38889 snR73snR73 106 nt0.33□□□□□ -2.36
SKN7P38889 YOL013W-AYOL013W-A 192 nt0.32□□□□□ -2.36
SKN7P38889 snR58snR58 96 nt0.31□□□□□ -2.36
SKN7P38889 YJL113WYJL113W 4647 nt0.2□□□□□ -2.38
SKN7P38889 CDC65tQ(CUG)M 72 nt0.1□□□□□ -2.39
SKN7P38889 YMR315W-AYMR315W-A 108 nt0.09□□□□□ -2.4
SKN7P38889 URB1YKL014C 5295 nt-0.04□□□□□ -2.42
SKN7P38889 snR87snR87 109 nt-0.14□□□□□ -2.43
SKN7P38889 YOR309CYOR309C 381 nt-0.14□□□□□ -2.43
SKN7P38889 YHL009W-BYHL009W-B 5409 nt-0.24□□□□□ -2.45
SKN7P38889 tP(UGG)QtP(UGG)Q 72 nt-0.25□□□□□ -2.45
SKN7P38889 snR33snR33 183 nt-0.37□□□□□ -2.47
SKN7P38889 tT(UGU)G1tT(UGU)G1 72 nt-0.54□□□□□ -2.5
SKN7P38889 tT(UGU)G2tT(UGU)G2 72 nt-0.54□□□□□ -2.5
SKN7P38889 tT(UGU)PtT(UGU)P 72 nt-0.54□□□□□ -2.5
SKN7P38889 tY(GUA)QtY(GUA)Q 84 nt-0.7□□□□□ -2.52
SKN7P38889 YNR077CYNR077C 255 nt-0.78□□□□□ -2.53
SKN7P38889 YBR223W-AYBR223W-A 120 nt-0.82□□□□□ -2.54
SKN7P38889 YBR126W-BYBR126W-B 144 nt-1.32□□□□□ -2.62
SKN7P38889 YJL136W-AYJL136W-A 84 nt-1.63□□□□□ -2.67
SKN7P38889 YDR543CYDR543C 300 nt-1.89□□□□□ -2.71
SKN7P38889 YOL166W-AYOL166W-A 156 nt-1.93□□□□□ -2.72
SKN7P38889 YJR162CYJR162C 351 nt-2.7□□□□□ -2.84
Retrieved 29 of 7,029 protein–RNA pairs in 6.5 ms