Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 snR161snR161 161 nt-0.28□□□□□ -2.45
CIC1P38779 YJL113WYJL113W 4647 nt-0.3□□□□□ -2.46
CIC1P38779 snR75snR75 89 nt-0.51□□□□□ -2.49
CIC1P38779 YHL009W-BYHL009W-B 5409 nt-0.53□□□□□ -2.49
CIC1P38779 URB1YKL014C 5295 nt-0.63□□□□□ -2.51
CIC1P38779 CDC65tQ(CUG)M 72 nt-0.74□□□□□ -2.53
CIC1P38779 snR33snR33 183 nt-0.82□□□□□ -2.54
CIC1P38779 snR40snR40 97 nt-0.82□□□□□ -2.54
CIC1P38779 snR6snR6 112 nt-0.83□□□□□ -2.54
CIC1P38779 YOR335W-AYOR335W-A 81 nt-0.89□□□□□ -2.55
CIC1P38779 RPL41BYDL133C-A 78 nt-0.94□□□□□ -2.56
CIC1P38779 tT(UGU)G1tT(UGU)G1 72 nt-0.94□□□□□ -2.56
CIC1P38779 tT(UGU)G2tT(UGU)G2 72 nt-0.94□□□□□ -2.56
CIC1P38779 tT(UGU)PtT(UGU)P 72 nt-0.94□□□□□ -2.56
CIC1P38779 YMR315W-AYMR315W-A 108 nt-0.95□□□□□ -2.56
CIC1P38779 tP(UGG)QtP(UGG)Q 72 nt-1.01□□□□□ -2.57
CIC1P38779 snR73snR73 106 nt-1.09□□□□□ -2.58
CIC1P38779 YOR309CYOR309C 381 nt-1.32□□□□□ -2.62
CIC1P38779 YBR223W-AYBR223W-A 120 nt-1.32□□□□□ -2.62
CIC1P38779 snR58snR58 96 nt-1.55□□□□□ -2.66
CIC1P38779 tY(GUA)QtY(GUA)Q 84 nt-1.58□□□□□ -2.66
CIC1P38779 tC(GCA)QtC(GCA)Q 76 nt-1.61□□□□□ -2.67
CIC1P38779 YNR077CYNR077C 255 nt-1.61□□□□□ -2.67
CIC1P38779 snR87snR87 109 nt-1.98□□□□□ -2.73
CIC1P38779 YBR126W-BYBR126W-B 144 nt-2.34□□□□□ -2.78
CIC1P38779 YDR543CYDR543C 300 nt-3.06□□□□□ -2.9
CIC1P38779 YOL166W-AYOL166W-A 156 nt-3.39□□□□□ -2.95
CIC1P38779 YJL136W-AYJL136W-A 84 nt-4.07□□□□□ -3.06
CIC1P38779 YJR162CYJR162C 351 nt-4.31□□□□□ -3.1
Retrieved 29 of 7,029 protein–RNA pairs in 4.5 ms