Protein–RNA interactions for Protein: P38624

PRE3, Proteasome subunit beta type-1, yeastyeast

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE3P38624 tT(AGU)O2tT(AGU)O2 73 nt0.54□□□□□ -2.32
PRE3P38624 tF(GAA)BtF(GAA)B 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)FtF(GAA)F 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)GtF(GAA)G 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)H1tF(GAA)H1 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)H2tF(GAA)H2 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)MtF(GAA)M 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)P1tF(GAA)P1 73 nt0.52□□□□□ -2.33
PRE3P38624 tF(GAA)P2tF(GAA)P2 73 nt0.52□□□□□ -2.33
PRE3P38624 URB1YKL014C 5295 nt0.46□□□□□ -2.34
PRE3P38624 CDC65tQ(CUG)M 72 nt0.42□□□□□ -2.34
PRE3P38624 YOL013W-AYOL013W-A 192 nt0.41□□□□□ -2.34
PRE3P38624 YMR315W-AYMR315W-A 108 nt0.38□□□□□ -2.35
PRE3P38624 snR87snR87 109 nt0.37□□□□□ -2.35
PRE3P38624 YOR309CYOR309C 381 nt0.14□□□□□ -2.39
PRE3P38624 YHL009W-BYHL009W-B 5409 nt0.04□□□□□ -2.4
PRE3P38624 tP(UGG)QtP(UGG)Q 72 nt-0.15□□□□□ -2.43
PRE3P38624 snR33snR33 183 nt-0.35□□□□□ -2.47
PRE3P38624 tY(GUA)QtY(GUA)Q 84 nt-0.68□□□□□ -2.52
PRE3P38624 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
PRE3P38624 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
PRE3P38624 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
PRE3P38624 YBR223W-AYBR223W-A 120 nt-1.16□□□□□ -2.6
PRE3P38624 YNR077CYNR077C 255 nt-1.18□□□□□ -2.6
PRE3P38624 YJL136W-AYJL136W-A 84 nt-1.4□□□□□ -2.63
PRE3P38624 YBR126W-BYBR126W-B 144 nt-1.61□□□□□ -2.67
PRE3P38624 YDR543CYDR543C 300 nt-2.64□□□□□ -2.83
PRE3P38624 YOL166W-AYOL166W-A 156 nt-2.87□□□□□ -2.87
PRE3P38624 YJR162CYJR162C 351 nt-3.47□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 106.1 ms