Protein–RNA interactions for Protein: P38144

ISW1, ISWI chromatin-remodeling complex ATPase ISW1, yeastyeast

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ISW1P38144 tA(UGC)QtA(UGC)Q 76 nt0.14□□□□□ -2.39
ISW1P38144 YJL113WYJL113W 4647 nt0.07□□□□□ -2.4
ISW1P38144 snR40snR40 97 nt-0.02□□□□□ -2.41
ISW1P38144 snR161snR161 161 nt-0.03□□□□□ -2.41
ISW1P38144 YHL009W-BYHL009W-B 5409 nt-0.31□□□□□ -2.46
ISW1P38144 snR6snR6 112 nt-0.31□□□□□ -2.46
ISW1P38144 YOR335W-AYOR335W-A 81 nt-0.33□□□□□ -2.46
ISW1P38144 CDC65tQ(CUG)M 72 nt-0.36□□□□□ -2.47
ISW1P38144 URB1YKL014C 5295 nt-0.43□□□□□ -2.48
ISW1P38144 RPL41BYDL133C-A 78 nt-0.45□□□□□ -2.48
ISW1P38144 snR73snR73 106 nt-0.48□□□□□ -2.49
ISW1P38144 tP(UGG)QtP(UGG)Q 72 nt-0.48□□□□□ -2.49
ISW1P38144 YMR315W-AYMR315W-A 108 nt-0.48□□□□□ -2.49
ISW1P38144 snR33snR33 183 nt-0.49□□□□□ -2.49
ISW1P38144 YOR309CYOR309C 381 nt-0.62□□□□□ -2.51
ISW1P38144 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
ISW1P38144 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
ISW1P38144 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
ISW1P38144 tC(GCA)QtC(GCA)Q 76 nt-0.86□□□□□ -2.55
ISW1P38144 snR58snR58 96 nt-0.92□□□□□ -2.56
ISW1P38144 YNR077CYNR077C 255 nt-0.93□□□□□ -2.56
ISW1P38144 tY(GUA)QtY(GUA)Q 84 nt-0.94□□□□□ -2.56
ISW1P38144 YBR223W-AYBR223W-A 120 nt-0.96□□□□□ -2.56
ISW1P38144 snR87snR87 109 nt-1.01□□□□□ -2.57
ISW1P38144 YBR126W-BYBR126W-B 144 nt-1.64□□□□□ -2.67
ISW1P38144 YDR543CYDR543C 300 nt-2.14□□□□□ -2.75
ISW1P38144 YOL166W-AYOL166W-A 156 nt-2.23□□□□□ -2.77
ISW1P38144 YJL136W-AYJL136W-A 84 nt-2.37□□□□□ -2.79
ISW1P38144 YJR162CYJR162C 351 nt-3.16□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 4.6 ms