Protein–RNA interactions for Protein: P36094

SPC42, Spindle pole body component SPC42, yeastyeast

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC42P36094 tA(UGC)QtA(UGC)Q 76 nt0.12□□□□□ -2.39
SPC42P36094 snR40snR40 97 nt0.09□□□□□ -2.4
SPC42P36094 snR161snR161 161 nt0.02□□□□□ -2.41
SPC42P36094 YJL113WYJL113W 4647 nt-0.01□□□□□ -2.41
SPC42P36094 YOR335W-AYOR335W-A 81 nt-0.22□□□□□ -2.44
SPC42P36094 snR6snR6 112 nt-0.23□□□□□ -2.45
SPC42P36094 RPL41BYDL133C-A 78 nt-0.28□□□□□ -2.45
SPC42P36094 CDC65tQ(CUG)M 72 nt-0.3□□□□□ -2.46
SPC42P36094 URB1YKL014C 5295 nt-0.37□□□□□ -2.47
SPC42P36094 snR73snR73 106 nt-0.39□□□□□ -2.47
SPC42P36094 YHL009W-BYHL009W-B 5409 nt-0.39□□□□□ -2.47
SPC42P36094 YMR315W-AYMR315W-A 108 nt-0.4□□□□□ -2.47
SPC42P36094 snR33snR33 183 nt-0.51□□□□□ -2.49
SPC42P36094 tP(UGG)QtP(UGG)Q 72 nt-0.54□□□□□ -2.5
SPC42P36094 tC(GCA)QtC(GCA)Q 76 nt-0.56□□□□□ -2.5
SPC42P36094 snR58snR58 96 nt-0.62□□□□□ -2.51
SPC42P36094 YOR309CYOR309C 381 nt-0.64□□□□□ -2.51
SPC42P36094 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
SPC42P36094 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
SPC42P36094 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
SPC42P36094 YNR077CYNR077C 255 nt-0.81□□□□□ -2.54
SPC42P36094 YBR223W-AYBR223W-A 120 nt-0.88□□□□□ -2.55
SPC42P36094 snR87snR87 109 nt-0.95□□□□□ -2.56
SPC42P36094 tY(GUA)QtY(GUA)Q 84 nt-0.96□□□□□ -2.56
SPC42P36094 YBR126W-BYBR126W-B 144 nt-1.73□□□□□ -2.69
SPC42P36094 YDR543CYDR543C 300 nt-1.99□□□□□ -2.73
SPC42P36094 YOL166W-AYOL166W-A 156 nt-2.06□□□□□ -2.74
SPC42P36094 YJL136W-AYJL136W-A 84 nt-2.42□□□□□ -2.8
SPC42P36094 YJR162CYJR162C 351 nt-3□□□□□ -2.89
Retrieved 29 of 7,029 protein–RNA pairs in 66.8 ms