Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rab5cP35278 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.05□□□□□ -0.16
Rab5cP35278 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rab5cP35278 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rab5cP35278 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab5cP35278 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rab5cP35278 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.04□□□□□ -0.16
Rab5cP35278 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rab5cP35278 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rab5cP35278 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rab5cP35278 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.04□□□□□ -0.16
Rab5cP35278 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.04□□□□□ -0.16
Rab5cP35278 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.04□□□□□ -0.16
Rab5cP35278 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rab5cP35278 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rab5cP35278 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rab5cP35278 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Rab5cP35278 Spcs1-204ENSMUST00000226782 949 ntBASIC14.03□□□□□ -0.16
Rab5cP35278 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rab5cP35278 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab5cP35278 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
Rab5cP35278 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab5cP35278 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Rab5cP35278 Gm22325-201ENSMUST00000158904 308 ntBASIC14.02□□□□□ -0.17
Rab5cP35278 Gm22238-201ENSMUST00000175222 88 ntBASIC14.02□□□□□ -0.17
Rab5cP35278 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.02□□□□□ -0.17
Rab5cP35278 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.02□□□□□ -0.17
Rab5cP35278 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.02□□□□□ -0.17
Rab5cP35278 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab5cP35278 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rab5cP35278 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab5cP35278 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rab5cP35278 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab5cP35278 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab5cP35278 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab5cP35278 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Rab5cP35278 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab5cP35278 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms