Protein–RNA interactions for Protein: P33417

IXR1, Intrastrand cross-link recognition protein, yeastyeast

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IXR1P33417 snR128snR128 126 nt0.51□□□□□ -2.33
IXR1P33417 YOL013W-AYOL013W-A 192 nt0.42□□□□□ -2.34
IXR1P33417 tA(UGC)QtA(UGC)Q 76 nt0.36□□□□□ -2.35
IXR1P33417 snR161snR161 161 nt0.27□□□□□ -2.37
IXR1P33417 snR6snR6 112 nt0.16□□□□□ -2.38
IXR1P33417 YOR335W-AYOR335W-A 81 nt0.16□□□□□ -2.38
IXR1P33417 RPL41BYDL133C-A 78 nt0.13□□□□□ -2.39
IXR1P33417 tC(GCA)QtC(GCA)Q 76 nt0.03□□□□□ -2.4
IXR1P33417 snR73snR73 106 nt-0.07□□□□□ -2.42
IXR1P33417 CDC65tQ(CUG)M 72 nt-0.12□□□□□ -2.43
IXR1P33417 snR58snR58 96 nt-0.15□□□□□ -2.43
IXR1P33417 YHL009W-BYHL009W-B 5409 nt-0.15□□□□□ -2.43
IXR1P33417 URB1YKL014C 5295 nt-0.17□□□□□ -2.44
IXR1P33417 YMR315W-AYMR315W-A 108 nt-0.26□□□□□ -2.45
IXR1P33417 YNR077CYNR077C 255 nt-0.37□□□□□ -2.47
IXR1P33417 YOR309CYOR309C 381 nt-0.57□□□□□ -2.5
IXR1P33417 tP(UGG)QtP(UGG)Q 72 nt-0.59□□□□□ -2.5
IXR1P33417 snR33snR33 183 nt-0.59□□□□□ -2.5
IXR1P33417 snR87snR87 109 nt-0.76□□□□□ -2.53
IXR1P33417 tT(UGU)G1tT(UGU)G1 72 nt-0.76□□□□□ -2.53
IXR1P33417 tT(UGU)G2tT(UGU)G2 72 nt-0.76□□□□□ -2.53
IXR1P33417 tT(UGU)PtT(UGU)P 72 nt-0.76□□□□□ -2.53
IXR1P33417 YBR223W-AYBR223W-A 120 nt-0.91□□□□□ -2.56
IXR1P33417 tY(GUA)QtY(GUA)Q 84 nt-1.12□□□□□ -2.59
IXR1P33417 YOL166W-AYOL166W-A 156 nt-1.63□□□□□ -2.67
IXR1P33417 YBR126W-BYBR126W-B 144 nt-1.85□□□□□ -2.71
IXR1P33417 YDR543CYDR543C 300 nt-2.12□□□□□ -2.75
IXR1P33417 YJL136W-AYJL136W-A 84 nt-2.74□□□□□ -2.85
IXR1P33417 YJR162CYJR162C 351 nt-3.3□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms