Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
RIM101P33400 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
RIM101P33400 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
RIM101P33400 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
RIM101P33400 snR6snR6 112 nt0.67□□□□□ -2.3
RIM101P33400 snR161snR161 161 nt0.66□□□□□ -2.3
RIM101P33400 tA(UGC)QtA(UGC)Q 76 nt0.62□□□□□ -2.31
RIM101P33400 YOL013W-AYOL013W-A 192 nt0.57□□□□□ -2.32
RIM101P33400 snR58snR58 96 nt0.56□□□□□ -2.32
RIM101P33400 snR73snR73 106 nt0.52□□□□□ -2.33
RIM101P33400 CDC65tQ(CUG)M 72 nt0.22□□□□□ -2.37
RIM101P33400 URB1YKL014C 5295 nt0.19□□□□□ -2.38
RIM101P33400 YMR315W-AYMR315W-A 108 nt0.18□□□□□ -2.38
RIM101P33400 snR87snR87 109 nt0.08□□□□□ -2.4
RIM101P33400 YOR309CYOR309C 381 nt-0.01□□□□□ -2.41
RIM101P33400 YHL009W-BYHL009W-B 5409 nt-0.09□□□□□ -2.42
RIM101P33400 tP(UGG)QtP(UGG)Q 72 nt-0.19□□□□□ -2.44
RIM101P33400 snR33snR33 183 nt-0.33□□□□□ -2.46
RIM101P33400 tT(UGU)G1tT(UGU)G1 72 nt-0.56□□□□□ -2.5
RIM101P33400 tT(UGU)G2tT(UGU)G2 72 nt-0.56□□□□□ -2.5
RIM101P33400 tT(UGU)PtT(UGU)P 72 nt-0.56□□□□□ -2.5
RIM101P33400 tY(GUA)QtY(GUA)Q 84 nt-0.64□□□□□ -2.51
RIM101P33400 YNR077CYNR077C 255 nt-0.74□□□□□ -2.53
RIM101P33400 YBR223W-AYBR223W-A 120 nt-0.79□□□□□ -2.54
RIM101P33400 YJL136W-AYJL136W-A 84 nt-1.38□□□□□ -2.63
RIM101P33400 YBR126W-BYBR126W-B 144 nt-1.4□□□□□ -2.63
RIM101P33400 YOL166W-AYOL166W-A 156 nt-1.79□□□□□ -2.7
RIM101P33400 YDR543CYDR543C 300 nt-1.83□□□□□ -2.7
RIM101P33400 YJR162CYJR162C 351 nt-2.57□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 4.4 ms