Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gja4P28235 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gja4P28235 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gja4P28235 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Gja4P28235 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gja4P28235 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gja4P28235 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gja4P28235 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.12■□□□□ 0.33
Gja4P28235 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.12■□□□□ 0.33
Gja4P28235 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Gm24589-201ENSMUST00000116692 94 ntBASIC17.12■□□□□ 0.33
Gja4P28235 Gm11336-201ENSMUST00000118168 334 ntBASIC17.12■□□□□ 0.33
Gja4P28235 Gm15794-201ENSMUST00000120182 631 ntBASIC17.12■□□□□ 0.33
Gja4P28235 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.12■□□□□ 0.33
Gja4P28235 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gja4P28235 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gja4P28235 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.11■□□□□ 0.33
Gja4P28235 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gja4P28235 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gja4P28235 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.11■□□□□ 0.33
Gja4P28235 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.11■□□□□ 0.33
Gja4P28235 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.11■□□□□ 0.33
Gja4P28235 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gja4P28235 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gja4P28235 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.11■□□□□ 0.33
Gja4P28235 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gja4P28235 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gja4P28235 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gja4P28235 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gja4P28235 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gja4P28235 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gja4P28235 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gja4P28235 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gja4P28235 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gja4P28235 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gja4P28235 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gja4P28235 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gja4P28235 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gja4P28235 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.09■□□□□ 0.33
Gja4P28235 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.09■□□□□ 0.33
Gja4P28235 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.09■□□□□ 0.33
Gja4P28235 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Gja4P28235 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.09■□□□□ 0.33
Gja4P28235 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.09■□□□□ 0.33
Gja4P28235 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gja4P28235 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gja4P28235 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gja4P28235 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gja4P28235 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gja4P28235 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gja4P28235 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gja4P28235 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms