Protein–RNA interactions for Protein: P25554

SGF29, SAGA-associated factor 29, yeastyeast

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGF29P25554 YDL114W-AYDL114W-A 114 nt-0.44□□□□□ -2.48
SGF29P25554 YLR149C-AYLR149C-A 87 nt-0.5□□□□□ -2.49
SGF29P25554 snR33snR33 183 nt-0.52□□□□□ -2.49
SGF29P25554 YHL009W-BYHL009W-B 5409 nt-0.53□□□□□ -2.49
SGF29P25554 tP(UGG)QtP(UGG)Q 72 nt-0.57□□□□□ -2.5
SGF29P25554 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
SGF29P25554 tT(UGU)G1tT(UGU)G1 72 nt-0.59□□□□□ -2.5
SGF29P25554 tT(UGU)G2tT(UGU)G2 72 nt-0.59□□□□□ -2.5
SGF29P25554 tT(UGU)PtT(UGU)P 72 nt-0.59□□□□□ -2.5
SGF29P25554 YMR315W-AYMR315W-A 108 nt-0.66□□□□□ -2.52
SGF29P25554 snR6snR6 112 nt-0.7□□□□□ -2.52
SGF29P25554 YOR335W-AYOR335W-A 81 nt-0.7□□□□□ -2.52
SGF29P25554 YNR077CYNR077C 255 nt-0.76□□□□□ -2.53
SGF29P25554 YKL096C-BYKL096C-B 150 nt-0.8□□□□□ -2.54
SGF29P25554 snR73snR73 106 nt-0.84□□□□□ -2.54
SGF29P25554 YOR309CYOR309C 381 nt-0.84□□□□□ -2.54
SGF29P25554 RPL41BYDL133C-A 78 nt-0.91□□□□□ -2.56
SGF29P25554 YBR223W-AYBR223W-A 120 nt-0.91□□□□□ -2.56
SGF29P25554 snR40snR40 97 nt-0.96□□□□□ -2.56
SGF29P25554 tY(GUA)QtY(GUA)Q 84 nt-0.99□□□□□ -2.57
SGF29P25554 snR75snR75 89 nt-1.08□□□□□ -2.58
SGF29P25554 snR87snR87 109 nt-1.36□□□□□ -2.63
SGF29P25554 snR58snR58 96 nt-1.39□□□□□ -2.63
SGF29P25554 tC(GCA)QtC(GCA)Q 76 nt-1.43□□□□□ -2.64
SGF29P25554 YBR126W-BYBR126W-B 144 nt-1.46□□□□□ -2.64
SGF29P25554 YDR543CYDR543C 300 nt-2.09□□□□□ -2.74
SGF29P25554 YOL166W-AYOL166W-A 156 nt-2.21□□□□□ -2.76
SGF29P25554 YJL136W-AYJL136W-A 84 nt-2.59□□□□□ -2.82
SGF29P25554 YJR162CYJR162C 351 nt-2.71□□□□□ -2.84
Retrieved 29 of 7,029 protein–RNA pairs in 5.1 ms