Protein–RNA interactions for Protein: P25037

UBP1, Ubiquitin carboxyl-terminal hydrolase 1, yeastyeast

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP1P25037 tA(UGC)QtA(UGC)Q 76 nt0.12□□□□□ -2.39
UBP1P25037 snR161snR161 161 nt-0.01□□□□□ -2.41
UBP1P25037 snR40snR40 97 nt-0.08□□□□□ -2.42
UBP1P25037 YJL113WYJL113W 4647 nt-0.17□□□□□ -2.44
UBP1P25037 YNR077CYNR077C 255 nt-0.38□□□□□ -2.47
UBP1P25037 URB1YKL014C 5295 nt-0.42□□□□□ -2.48
UBP1P25037 RPL41BYDL133C-A 78 nt-0.46□□□□□ -2.48
UBP1P25037 snR6snR6 112 nt-0.51□□□□□ -2.49
UBP1P25037 YOR335W-AYOR335W-A 81 nt-0.51□□□□□ -2.49
UBP1P25037 CDC65tQ(CUG)M 72 nt-0.55□□□□□ -2.5
UBP1P25037 YHL009W-BYHL009W-B 5409 nt-0.58□□□□□ -2.5
UBP1P25037 snR33snR33 183 nt-0.6□□□□□ -2.51
UBP1P25037 YMR315W-AYMR315W-A 108 nt-0.64□□□□□ -2.51
UBP1P25037 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
UBP1P25037 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
UBP1P25037 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
UBP1P25037 snR73snR73 106 nt-0.74□□□□□ -2.53
UBP1P25037 tP(UGG)QtP(UGG)Q 72 nt-0.78□□□□□ -2.53
UBP1P25037 YBR223W-AYBR223W-A 120 nt-0.87□□□□□ -2.55
UBP1P25037 tC(GCA)QtC(GCA)Q 76 nt-0.99□□□□□ -2.57
UBP1P25037 snR58snR58 96 nt-1.01□□□□□ -2.57
UBP1P25037 YOR309CYOR309C 381 nt-1.05□□□□□ -2.58
UBP1P25037 tY(GUA)QtY(GUA)Q 84 nt-1.15□□□□□ -2.59
UBP1P25037 snR87snR87 109 nt-1.55□□□□□ -2.66
UBP1P25037 YBR126W-BYBR126W-B 144 nt-1.69□□□□□ -2.68
UBP1P25037 YOL166W-AYOL166W-A 156 nt-1.91□□□□□ -2.72
UBP1P25037 YDR543CYDR543C 300 nt-2.02□□□□□ -2.73
UBP1P25037 YJR162CYJR162C 351 nt-3□□□□□ -2.89
UBP1P25037 YJL136W-AYJL136W-A 84 nt-3.09□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 5.8 ms