Protein–RNA interactions for Protein: P22543

VPS34, Phosphatidylinositol 3-kinase VPS34, yeastyeast

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS34P22543 SBH2YER019C-A 267 nt0.06□□□□□ -2.4
VPS34P22543 snR161snR161 161 nt-0.06□□□□□ -2.42
VPS34P22543 snR40snR40 97 nt-0.18□□□□□ -2.44
VPS34P22543 YJL113WYJL113W 4647 nt-0.2□□□□□ -2.44
VPS34P22543 YOR335W-AYOR335W-A 81 nt-0.36□□□□□ -2.47
VPS34P22543 snR6snR6 112 nt-0.37□□□□□ -2.47
VPS34P22543 CDC65tQ(CUG)M 72 nt-0.39□□□□□ -2.47
VPS34P22543 RPL41BYDL133C-A 78 nt-0.46□□□□□ -2.48
VPS34P22543 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
VPS34P22543 YMR315W-AYMR315W-A 108 nt-0.49□□□□□ -2.49
VPS34P22543 snR73snR73 106 nt-0.53□□□□□ -2.49
VPS34P22543 snR33snR33 183 nt-0.53□□□□□ -2.49
VPS34P22543 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
VPS34P22543 tP(UGG)QtP(UGG)Q 72 nt-0.57□□□□□ -2.5
VPS34P22543 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
VPS34P22543 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
VPS34P22543 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
VPS34P22543 YOR309CYOR309C 381 nt-0.72□□□□□ -2.52
VPS34P22543 tC(GCA)QtC(GCA)Q 76 nt-0.82□□□□□ -2.54
VPS34P22543 snR58snR58 96 nt-0.86□□□□□ -2.55
VPS34P22543 tY(GUA)QtY(GUA)Q 84 nt-1.02□□□□□ -2.57
VPS34P22543 YBR223W-AYBR223W-A 120 nt-1.02□□□□□ -2.57
VPS34P22543 snR87snR87 109 nt-1.1□□□□□ -2.59
VPS34P22543 YNR077CYNR077C 255 nt-1.36□□□□□ -2.63
VPS34P22543 YBR126W-BYBR126W-B 144 nt-1.79□□□□□ -2.7
VPS34P22543 YDR543CYDR543C 300 nt-2.34□□□□□ -2.78
VPS34P22543 YJL136W-AYJL136W-A 84 nt-2.55□□□□□ -2.82
VPS34P22543 YOL166W-AYOL166W-A 156 nt-2.8□□□□□ -2.86
VPS34P22543 YJR162CYJR162C 351 nt-3.23□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 2.5 ms