Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YOR231C-AYOR231C-A 201 nt-5.42□□□□□ -3.28
XRN1P22147 snR64snR64 101 nt-5.65□□□□□ -3.31
XRN1P22147 YMR046W-AYMR046W-A 129 nt-5.65□□□□□ -3.31
XRN1P22147 tC(GCA)QtC(GCA)Q 76 nt-5.68□□□□□ -3.32
XRN1P22147 YOR225WYOR225W 330 nt-5.7□□□□□ -3.32
XRN1P22147 snR62snR62 100 nt-5.71□□□□□ -3.32
XRN1P22147 YLR294CYLR294C 330 nt-5.74□□□□□ -3.33
XRN1P22147 YNL170WYNL170W 396 nt-5.88□□□□□ -3.35
XRN1P22147 YGL041C-BYGL041C-B 183 nt-5.91□□□□□ -3.36
XRN1P22147 snR40snR40 97 nt-5.99□□□□□ -3.37
XRN1P22147 snR61snR61 90 nt-6.03□□□□□ -3.37
XRN1P22147 YNL103W-AYNL103W-A 90 nt-6.04□□□□□ -3.38
XRN1P22147 YLR466C-BYLR466C-B 117 nt-6.09□□□□□ -3.38
XRN1P22147 tR(ACG)Q2tR(ACG)Q2 74 nt-6.22□□□□□ -3.41
XRN1P22147 YNL338WYNL338W 159 nt-6.29□□□□□ -3.42
XRN1P22147 tM(CAU)Q1tM(CAU)Q1 76 nt-6.3□□□□□ -3.42
XRN1P22147 YLR149C-AYLR149C-A 87 nt-6.35□□□□□ -3.43
XRN1P22147 snR53snR53 91 nt-6.49□□□□□ -3.45
XRN1P22147 Q0032Q0032 291 nt-6.56□□□□□ -3.46
XRN1P22147 Q0144Q0144 330 nt-7.06□□□□□ -3.54
XRN1P22147 YLL066W-BYLL066W-B 171 nt-7.06□□□□□ -3.54
XRN1P22147 YMR326CYMR326C 309 nt-7.29□□□□□ -3.58
XRN1P22147 YHR217CYHR217C 462 nt-7.43□□□□□ -3.6
XRN1P22147 Q0143Q0143 153 nt-7.73□□□□□ -3.65
XRN1P22147 ATP8Q0080 147 nt-8.16□□□□□ -3.72
XRN1P22147 snR75snR75 89 nt-8.44□□□□□ -3.76
XRN1P22147 YDL247W-AYDL247W-A 75 nt-8.54□□□□□ -3.78
XRN1P22147 YBL109WYBL109W 336 nt-8.55□□□□□ -3.78
XRN1P22147 Q0092Q0092 141 nt-9.31□□□□□ -3.9
Retrieved 29 of 7,029 protein–RNA pairs in 33.8 ms