Protein–RNA interactions for Protein: P22138

RPA135, DNA-directed RNA polymerase I subunit RPA135, yeastyeast

Known RBP Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA135P22138 YJL113WYJL113W 4647 nt-0.1□□□□□ -2.43
RPA135P22138 snR161snR161 161 nt-0.19□□□□□ -2.44
RPA135P22138 snR75snR75 89 nt-0.24□□□□□ -2.45
RPA135P22138 YHL009W-BYHL009W-B 5409 nt-0.27□□□□□ -2.45
RPA135P22138 URB1YKL014C 5295 nt-0.33□□□□□ -2.46
RPA135P22138 CDC65tQ(CUG)M 72 nt-0.48□□□□□ -2.49
RPA135P22138 snR40snR40 97 nt-0.5□□□□□ -2.49
RPA135P22138 snR6snR6 112 nt-0.51□□□□□ -2.49
RPA135P22138 YOR335W-AYOR335W-A 81 nt-0.55□□□□□ -2.5
RPA135P22138 snR33snR33 183 nt-0.6□□□□□ -2.51
RPA135P22138 YMR315W-AYMR315W-A 108 nt-0.65□□□□□ -2.51
RPA135P22138 RPL41BYDL133C-A 78 nt-0.68□□□□□ -2.52
RPA135P22138 snR73snR73 106 nt-0.69□□□□□ -2.52
RPA135P22138 tP(UGG)QtP(UGG)Q 72 nt-0.7□□□□□ -2.52
RPA135P22138 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
RPA135P22138 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
RPA135P22138 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
RPA135P22138 YOR309CYOR309C 381 nt-0.89□□□□□ -2.55
RPA135P22138 YNR077CYNR077C 255 nt-0.96□□□□□ -2.56
RPA135P22138 YBR223W-AYBR223W-A 120 nt-0.96□□□□□ -2.56
RPA135P22138 tC(GCA)QtC(GCA)Q 76 nt-1.07□□□□□ -2.58
RPA135P22138 snR58snR58 96 nt-1.08□□□□□ -2.58
RPA135P22138 tY(GUA)QtY(GUA)Q 84 nt-1.12□□□□□ -2.59
RPA135P22138 snR87snR87 109 nt-1.34□□□□□ -2.62
RPA135P22138 YBR126W-BYBR126W-B 144 nt-1.75□□□□□ -2.69
RPA135P22138 YDR543CYDR543C 300 nt-2.23□□□□□ -2.77
RPA135P22138 YOL166W-AYOL166W-A 156 nt-2.27□□□□□ -2.77
RPA135P22138 YJL136W-AYJL136W-A 84 nt-2.93□□□□□ -2.88
RPA135P22138 YJR162CYJR162C 351 nt-3.15□□□□□ -2.91
Retrieved 29 of 7,029 protein–RNA pairs in 82.2 ms