Protein–RNA interactions for Protein: P20676

NUP1, Nucleoporin NUP1, yeastyeast

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP1P20676 snR77snR77 88 nt0.03□□□□□ -2.4
NUP1P20676 YJL113WYJL113W 4647 nt0.02□□□□□ -2.41
NUP1P20676 snR161snR161 161 nt-0.11□□□□□ -2.43
NUP1P20676 YHL009W-BYHL009W-B 5409 nt-0.18□□□□□ -2.44
NUP1P20676 snR40snR40 97 nt-0.26□□□□□ -2.45
NUP1P20676 snR6snR6 112 nt-0.38□□□□□ -2.47
NUP1P20676 CDC65tQ(CUG)M 72 nt-0.39□□□□□ -2.47
NUP1P20676 URB1YKL014C 5295 nt-0.41□□□□□ -2.47
NUP1P20676 YOR335W-AYOR335W-A 81 nt-0.43□□□□□ -2.48
NUP1P20676 RPL41BYDL133C-A 78 nt-0.48□□□□□ -2.49
NUP1P20676 YNR077CYNR077C 255 nt-0.49□□□□□ -2.49
NUP1P20676 YMR315W-AYMR315W-A 108 nt-0.53□□□□□ -2.49
NUP1P20676 snR33snR33 183 nt-0.53□□□□□ -2.49
NUP1P20676 snR73snR73 106 nt-0.57□□□□□ -2.5
NUP1P20676 tP(UGG)QtP(UGG)Q 72 nt-0.63□□□□□ -2.51
NUP1P20676 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
NUP1P20676 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
NUP1P20676 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
NUP1P20676 YOR309CYOR309C 381 nt-0.77□□□□□ -2.53
NUP1P20676 YBR223W-AYBR223W-A 120 nt-0.8□□□□□ -2.54
NUP1P20676 snR58snR58 96 nt-0.82□□□□□ -2.54
NUP1P20676 tC(GCA)QtC(GCA)Q 76 nt-0.82□□□□□ -2.54
NUP1P20676 tY(GUA)QtY(GUA)Q 84 nt-1□□□□□ -2.57
NUP1P20676 snR87snR87 109 nt-1.14□□□□□ -2.59
NUP1P20676 YBR126W-BYBR126W-B 144 nt-1.52□□□□□ -2.65
NUP1P20676 YOL166W-AYOL166W-A 156 nt-1.55□□□□□ -2.66
NUP1P20676 YDR543CYDR543C 300 nt-1.84□□□□□ -2.7
NUP1P20676 YJL136W-AYJL136W-A 84 nt-2.58□□□□□ -2.82
NUP1P20676 YJR162CYJR162C 351 nt-2.87□□□□□ -2.87
Retrieved 29 of 7,029 protein–RNA pairs in 18.5 ms