Protein–RNA interactions for Protein: P09880

TRL1, tRNA ligase, yeastyeast

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRL1P09880 tV(UAC)QtV(UAC)Q 76 nt-0.35□□□□□ -2.47
TRL1P09880 snR77snR77 88 nt-0.37□□□□□ -2.47
TRL1P09880 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
TRL1P09880 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.49
TRL1P09880 snR33snR33 183 nt-0.67□□□□□ -2.52
TRL1P09880 CDC65tQ(CUG)M 72 nt-0.7□□□□□ -2.52
TRL1P09880 snR75snR75 89 nt-0.76□□□□□ -2.53
TRL1P09880 tP(UGG)QtP(UGG)Q 72 nt-0.82□□□□□ -2.54
TRL1P09880 YMR315W-AYMR315W-A 108 nt-0.84□□□□□ -2.54
TRL1P09880 snR6snR6 112 nt-0.86□□□□□ -2.55
TRL1P09880 tT(UGU)G1tT(UGU)G1 72 nt-0.87□□□□□ -2.55
TRL1P09880 tT(UGU)G2tT(UGU)G2 72 nt-0.87□□□□□ -2.55
TRL1P09880 tT(UGU)PtT(UGU)P 72 nt-0.87□□□□□ -2.55
TRL1P09880 YOR335W-AYOR335W-A 81 nt-0.91□□□□□ -2.56
TRL1P09880 RPL41BYDL133C-A 78 nt-0.96□□□□□ -2.56
TRL1P09880 snR40snR40 97 nt-1.02□□□□□ -2.57
TRL1P09880 snR73snR73 106 nt-1.06□□□□□ -2.58
TRL1P09880 YNR077CYNR077C 255 nt-1.07□□□□□ -2.58
TRL1P09880 YOR309CYOR309C 381 nt-1.13□□□□□ -2.59
TRL1P09880 YBR223W-AYBR223W-A 120 nt-1.16□□□□□ -2.6
TRL1P09880 tY(GUA)QtY(GUA)Q 84 nt-1.28□□□□□ -2.61
TRL1P09880 snR58snR58 96 nt-1.51□□□□□ -2.65
TRL1P09880 tC(GCA)QtC(GCA)Q 76 nt-1.61□□□□□ -2.67
TRL1P09880 snR87snR87 109 nt-1.74□□□□□ -2.69
TRL1P09880 YBR126W-BYBR126W-B 144 nt-2.11□□□□□ -2.75
TRL1P09880 YDR543CYDR543C 300 nt-2.67□□□□□ -2.84
TRL1P09880 YOL166W-AYOL166W-A 156 nt-2.69□□□□□ -2.84
TRL1P09880 YJL136W-AYJL136W-A 84 nt-3.31□□□□□ -2.94
TRL1P09880 YJR162CYJR162C 351 nt-3.74□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 56.1 ms