Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YDL114W-AYDL114W-A 114 nt-1.96□□□□□ -2.72
RAD3P06839 snR62snR62 100 nt-1.97□□□□□ -2.72
RAD3P06839 YDL159W-AYDL159W-A 132 nt-1.99□□□□□ -2.73
RAD3P06839 snR73snR73 106 nt-2.02□□□□□ -2.73
RAD3P06839 YGR122C-AYGR122C-A 129 nt-2.11□□□□□ -2.75
RAD3P06839 RPL41BYDL133C-A 78 nt-2.13□□□□□ -2.75
RAD3P06839 ATP8Q0080 147 nt-2.14□□□□□ -2.75
RAD3P06839 YDR543CYDR543C 300 nt-2.14□□□□□ -2.75
RAD3P06839 snR64snR64 101 nt-2.15□□□□□ -2.75
RAD3P06839 snR85snR85 171 nt-2.15□□□□□ -2.75
RAD3P06839 Q0143Q0143 153 nt-2.34□□□□□ -2.78
RAD3P06839 YMR326CYMR326C 309 nt-2.45□□□□□ -2.8
RAD3P06839 YHR217CYHR217C 462 nt-2.46□□□□□ -2.8
RAD3P06839 YLL066W-BYLL066W-B 171 nt-2.48□□□□□ -2.81
RAD3P06839 Q0092Q0092 141 nt-2.53□□□□□ -2.81
RAD3P06839 YKL096C-BYKL096C-B 150 nt-2.54□□□□□ -2.82
RAD3P06839 YOL166W-AYOL166W-A 156 nt-2.54□□□□□ -2.82
RAD3P06839 YDR524C-AYDR524C-A 120 nt-2.59□□□□□ -2.82
RAD3P06839 snR53snR53 91 nt-2.6□□□□□ -2.83
RAD3P06839 YBL109WYBL109W 336 nt-2.67□□□□□ -2.84
RAD3P06839 YLR149C-AYLR149C-A 87 nt-2.68□□□□□ -2.84
RAD3P06839 snR87snR87 109 nt-2.77□□□□□ -2.85
RAD3P06839 snR58snR58 96 nt-2.92□□□□□ -2.88
RAD3P06839 YJR162CYJR162C 351 nt-2.92□□□□□ -2.88
RAD3P06839 snR40snR40 97 nt-2.98□□□□□ -2.89
RAD3P06839 YDL247W-AYDL247W-A 75 nt-3.08□□□□□ -2.9
RAD3P06839 tC(GCA)QtC(GCA)Q 76 nt-3.26□□□□□ -2.93
RAD3P06839 YJL136W-AYJL136W-A 84 nt-3.54□□□□□ -2.98
RAD3P06839 snR75snR75 89 nt-3.95□□□□□ -3.04
Retrieved 29 of 7,029 protein–RNA pairs in 5.9 ms