Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeast

Predictions only

Length 398 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VAR1	P02381	tV(UAC)Q	tV(UAC)Q	76 nt		-1.31	□□□□□ -2.62
VAR1	P02381	snR62	snR62	100 nt		-1.33	□□□□□ -2.62
VAR1	P02381	snR73	snR73	106 nt		-1.36	□□□□□ -2.63
VAR1	P02381	YGR122C-A	YGR122C-A	129 nt		-1.38	□□□□□ -2.63
VAR1	P02381	RPL41B	YDL133C-A	78 nt		-1.39	□□□□□ -2.63
VAR1	P02381	snR85	snR85	171 nt		-1.43	□□□□□ -2.64
VAR1	P02381	ATP8	Q0080	147 nt		-1.43	□□□□□ -2.64
VAR1	P02381	snR64	snR64	101 nt		-1.44	□□□□□ -2.64
VAR1	P02381	Q0143	Q0143	153 nt		-1.58	□□□□□ -2.66
VAR1	P02381	YBR126W-B	YBR126W-B	144 nt		-1.6	□□□□□ -2.67
VAR1	P02381	YLL066W-B	YLL066W-B	171 nt		-1.63	□□□□□ -2.67
VAR1	P02381	YMR326C	YMR326C	309 nt		-1.65	□□□□□ -2.67
VAR1	P02381	YHR217C	YHR217C	462 nt		-1.66	□□□□□ -2.68
VAR1	P02381	Q0092	Q0092	141 nt		-1.67	□□□□□ -2.68
VAR1	P02381	YKL096C-B	YKL096C-B	150 nt		-1.7	□□□□□ -2.68
VAR1	P02381	YBL109W	YBL109W	336 nt		-1.76	□□□□□ -2.69
VAR1	P02381	snR53	snR53	91 nt		-1.79	□□□□□ -2.7
VAR1	P02381	YDR524C-A	YDR524C-A	120 nt		-1.81	□□□□□ -2.7
VAR1	P02381	YLR149C-A	YLR149C-A	87 nt		-1.83	□□□□□ -2.7
VAR1	P02381	snR87	snR87	109 nt		-1.86	□□□□□ -2.71
VAR1	P02381	snR40	snR40	97 nt		-1.98	□□□□□ -2.73
VAR1	P02381	snR58	snR58	96 nt		-1.99	□□□□□ -2.73
VAR1	P02381	YDL247W-A	YDL247W-A	75 nt		-2.06	□□□□□ -2.74
VAR1	P02381	YDR543C	YDR543C	300 nt		-2.13	□□□□□ -2.75
VAR1	P02381	tC(GCA)Q	tC(GCA)Q	76 nt		-2.21	□□□□□ -2.76
VAR1	P02381	YOL166W-A	YOL166W-A	156 nt		-2.32	□□□□□ -2.78
VAR1	P02381	snR75	snR75	89 nt		-2.63	□□□□□ -2.83
VAR1	P02381	YJL136W-A	YJL136W-A	84 nt		-2.78	□□□□□ -2.85
VAR1	P02381	YJR162C	YJR162C	351 nt		-2.89	□□□□□ -2.87

Retrieved 29 of 7,029 protein–RNA pairs in 4.5 ms