Protein–RNA interactions for Protein: P00560

PGK1, Phosphoglycerate kinase, yeastyeast

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGK1P00560 SBH2YER019C-A 267 nt0.05□□□□□ -2.4
PGK1P00560 snR161snR161 161 nt-0.06□□□□□ -2.42
PGK1P00560 snR40snR40 97 nt-0.19□□□□□ -2.44
PGK1P00560 YJL113WYJL113W 4647 nt-0.22□□□□□ -2.44
PGK1P00560 YOR335W-AYOR335W-A 81 nt-0.36□□□□□ -2.47
PGK1P00560 snR6snR6 112 nt-0.37□□□□□ -2.47
PGK1P00560 CDC65tQ(CUG)M 72 nt-0.39□□□□□ -2.47
PGK1P00560 RPL41BYDL133C-A 78 nt-0.44□□□□□ -2.48
PGK1P00560 YMR315W-AYMR315W-A 108 nt-0.46□□□□□ -2.48
PGK1P00560 snR73snR73 106 nt-0.52□□□□□ -2.49
PGK1P00560 snR33snR33 183 nt-0.52□□□□□ -2.49
PGK1P00560 tP(UGG)QtP(UGG)Q 72 nt-0.54□□□□□ -2.5
PGK1P00560 YHL009W-BYHL009W-B 5409 nt-0.54□□□□□ -2.5
PGK1P00560 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
PGK1P00560 YOR309CYOR309C 381 nt-0.71□□□□□ -2.52
PGK1P00560 tT(UGU)G1tT(UGU)G1 72 nt-0.76□□□□□ -2.53
PGK1P00560 tT(UGU)G2tT(UGU)G2 72 nt-0.76□□□□□ -2.53
PGK1P00560 tT(UGU)PtT(UGU)P 72 nt-0.76□□□□□ -2.53
PGK1P00560 tC(GCA)QtC(GCA)Q 76 nt-0.83□□□□□ -2.54
PGK1P00560 snR58snR58 96 nt-0.86□□□□□ -2.55
PGK1P00560 tY(GUA)QtY(GUA)Q 84 nt-0.99□□□□□ -2.57
PGK1P00560 YNR077CYNR077C 255 nt-1.04□□□□□ -2.58
PGK1P00560 YBR223W-AYBR223W-A 120 nt-1.05□□□□□ -2.58
PGK1P00560 snR87snR87 109 nt-1.08□□□□□ -2.58
PGK1P00560 YBR126W-BYBR126W-B 144 nt-1.76□□□□□ -2.69
PGK1P00560 YDR543CYDR543C 300 nt-2.42□□□□□ -2.8
PGK1P00560 YOL166W-AYOL166W-A 156 nt-2.47□□□□□ -2.8
PGK1P00560 YJL136W-AYJL136W-A 84 nt-2.49□□□□□ -2.81
PGK1P00560 YJR162CYJR162C 351 nt-3.53□□□□□ -2.97
Retrieved 29 of 7,029 protein–RNA pairs in 47.7 ms