Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Gm5264-201ENSMUST00000190584 848 ntBASIC17.62■□□□□ 0.41
Syn1O88935 Gm10576-201ENSMUST00000191927 825 ntBASIC17.62■□□□□ 0.41
Syn1O88935 Gm6376-201ENSMUST00000209407 580 ntBASIC17.62■□□□□ 0.41
Syn1O88935 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.62■□□□□ 0.41
Syn1O88935 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.62■□□□□ 0.41
Syn1O88935 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.62■□□□□ 0.41
Syn1O88935 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syn1O88935 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Syn1O88935 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Syn1O88935 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.61■□□□□ 0.41
Syn1O88935 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.61■□□□□ 0.41
Syn1O88935 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Syn1O88935 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syn1O88935 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Syn1O88935 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syn1O88935 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syn1O88935 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.6■□□□□ 0.41
Syn1O88935 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.6■□□□□ 0.41
Syn1O88935 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Syn1O88935 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.6■□□□□ 0.41
Syn1O88935 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Syn1O88935 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.6■□□□□ 0.41
Syn1O88935 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Syn1O88935 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syn1O88935 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.59■□□□□ 0.41
Syn1O88935 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Syn1O88935 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.59■□□□□ 0.41
Syn1O88935 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.59■□□□□ 0.41
Syn1O88935 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.59■□□□□ 0.41
Syn1O88935 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syn1O88935 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.59■□□□□ 0.41
Syn1O88935 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syn1O88935 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Syn1O88935 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Syn1O88935 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.58■□□□□ 0.41
Syn1O88935 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.58■□□□□ 0.4
Syn1O88935 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.58■□□□□ 0.4
Syn1O88935 Gm7862-201ENSMUST00000121461 292 ntBASIC17.58■□□□□ 0.4
Syn1O88935 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Syn1O88935 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syn1O88935 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syn1O88935 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syn1O88935 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Syn1O88935 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Syn1O88935 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syn1O88935 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Syn1O88935 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syn1O88935 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms